PhyloBLAST: Facilitating phylogenetic analysis of BLAST results

Fiona S.L. Brinkman, Ivan Wan, Robert Hancock, Ann M. Rose, Steven J. Jones

Research output: Contribution to journalArticle

16 Citations (Scopus)

Abstract

PhyloBLAST is an internet-accessed application based on CGI/Perl programming that compares a users protein sequence to a SwissProt/TREMBL database using BLAST2 and then allows phylogenetic analyses to be performed on selected sequences from the BLAST output. Flexible features such as ability to input your own multiple sequence alignment and use PHYLIP program options provide additional web-based phylogenetic analysis functionality beyond the analysis of a BLAST result.

LanguageEnglish
Pages385-387
Number of pages3
JournalBioinformatics
Volume17
Issue number4
DOIs
Publication statusPublished - 1 Jan 2001

ASJC Scopus subject areas

  • Statistics and Probability
  • Biochemistry
  • Molecular Biology
  • Computer Science Applications
  • Computational Theory and Mathematics
  • Computational Mathematics

Cite this

Brinkman, Fiona S.L. ; Wan, Ivan ; Hancock, Robert ; Rose, Ann M. ; Jones, Steven J. / PhyloBLAST : Facilitating phylogenetic analysis of BLAST results. In: Bioinformatics. 2001 ; Vol. 17, No. 4. pp. 385-387.
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PhyloBLAST : Facilitating phylogenetic analysis of BLAST results. / Brinkman, Fiona S.L.; Wan, Ivan; Hancock, Robert; Rose, Ann M.; Jones, Steven J.

In: Bioinformatics, Vol. 17, No. 4, 01.01.2001, p. 385-387.

Research output: Contribution to journalArticle

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