Chung Kok

BSc(BiomedSci), GDip(DataSci), Ph.D

  • 764 Citations
  • 13 h-Index
20062020

Research output per year

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Personal profile

Public Profile

I am a senior bioinformatician and postdoctoral researcher working on chronic myeloid leukaemia project at Precision Medicine Theme, SAHMRI. Additionally, I am holding an honorary title of affiliate senior lecturer from the School of Medicine at the University of Adelaide. I have the expertise in both molecular cancer biology and bioinformatics, these skills have allowed me to establish and collaborate on many research projects involving biology and bioinformatics with clinical researchers, biologists and computer scientists both nationally and internationally. With these skillsets, I am currently leading a biomarker project to predict poor long-term clinical outcome of chronic myeloid leukaemia patient at the time of diagnosis using machine learning algorithms. I have extensive experiences with R in analysing high-throughput genomic and transcriptomic sequencing data sets of varying sizes and complexity using high performance computing system.

External positions

Senior lecturer, University of Adelaide

Keywords

  • biomarkers
  • big data
  • bioinformatics
  • next-generation sequencing
  • machine learning
  • precision medicine
  • treatment resistant
  • leukaemia

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Research Output

  • 764 Citations
  • 13 h-Index
  • 27 Article
  • 9 Letter

Lineage of measurable residual disease in patients with chronic myeloid leukemia in treatment-free remission

Pagani, I. S., Dang, P., Saunders, V. A., Grose, R., Shanmuganathan, N., Kok, C. H., Carne, L., Rwodzi, Z., Watts, S., McLean, J., Braley, J., Altamura, H., Yeung, D. T., Branford, S., Yong, A. S. M., White, D. L., Hughes, T. P. & Ross, D. M., Apr 2020, In : Leukemia. 34, 4, p. 1052-1061 10 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)
3 Citations (Scopus)

Co-fuse: a new class discovery analysis tool to identify and prioritize recurrent fusion genes from RNA-sequencing data

Paisitkriangkrai, S., Quek, K., Nievergall, E., Jabbour, A., Zannettino, A. & Kok, C., 1 Oct 2018, In : Molecular Genetics and Genomics. 293, 5, p. 1217-1229 13 p.

Research output: Contribution to journalArticle

Long-term treatment-free remission of chronic myeloid leukemia with falling levels of residual leukemic cells

on behalf of the Australasian Leukaemia and Lymphoma Group (ALLG), 1 Dec 2018, In : Leukemia. 32, 12, p. 2572-2579 8 p.

Research output: Contribution to journalArticle

14 Citations (Scopus)