South Australian Health and Medical Research Institute

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2020

AB569, a nontoxic chemical tandem that kills major human pathogenic bacteria

McDaniel, C. T., Panmanee, W., Winsor, G. L., Gill, E., Bertelli, C., Schurr, M. J., Dongare, P., Paul, A. T., Ko, S. H. B., Lau, G. W., Dasgupta, N., Bogue, A. L., Miller, W. E., Mortensen, J. E., Haslam, D. B., Dexheimer, P., Muruve, D. A., Aronow, B. J., Forbes, M. D. E., Danilczuk, M. & 4 others, Brinkman, F. S. L., Hancock, R., Meyer, T. J. & Hassett, D. J., 3 Mar 2020, In : Proceedings of the National Academy of Sciences of the United States of America. 117, 9, p. 4921-4930 10 p.

Research output: Contribution to journalArticle

Abstract P507: Interplay Between Diet and Gut Microbiota, and Circulating Levels of Trimethylamine N-oxide: Findings From the Men’s Lifestyle Validation Study

Li, J., Li, Y., Ivey, K., Wang, D., Wilkinson, J., Franke, A., Chan, A., Huttenhower, C., Hu, F. B., Rimm, E. & Sun, Q., 3 Mar 2020, In : Circulation. 141, Suppl_1

Research output: Contribution to journalArticle

Accelerated brain aging towards transcriptional inversion in a zebrafish model of the K115fs mutation of human PSEN2

Hin, N., Newman, M., Kaslin, J., Douek, A. M., Lumsden, A., Nik, S. H. M., Dong, Y., Zhou, X. F., Manucat-Tan, N. B., Ludington, A., Adelson, D. L., Pederson, S. & Lardelli, M., 24 Jan 2020, In : PLoS ONE. 15, 1, e0227258.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Accelerating development of high-risk neuroblastoma patient-derived xenograft models for preclinical testing and personalised therapy

Kamili, A., Gifford, A. J., Li, N., Mayoh, C., Chow, S. O., Failes, T. W., Eden, G. L., Cadiz, R., Xie, J., Lukeis, R. E., Norris, M. D., Haber, M., McCowage, G. B., Arndt, G. M., Trahair, T. N. & Fletcher, J. I., 3 Mar 2020, In : British Journal of Cancer. 122, 5, p. 680-691 12 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Advanced resistance studies identify two discrete mechanisms in Staphylococcus aureus to overcome antibacterial compounds that target biotin protein ligase

Hayes, A. J., Satiaputra, J., Sternicki, L. M., Paparella, A. S., Feng, Z., Lee, K. J., Blanco-Rodriguez, B., Tieu, W., Eijkelkamp, B. A., Shearwin, K. E., Pukala, T. L., Abell, A. D., Booker, G. W. & Polyak, S. W., Apr 2020, In : Antibiotics. 9, 4, 165.

Research output: Contribution to journalArticle

Afghan families and health professionals’ access to health information during and after pregnancy

Riggs, E., Yelland, J., Szwarc, J., Duell-Piening, P., Wahidi, S., Fouladi, F., Casey, S., Chesters, D. & Brown, S., 1 May 2020, In : Women and Birth. 33, 3, p. e209-e215

Research output: Contribution to journalArticle

Androgens in men study (AIMS): Protocol for meta-analyses of individual participant data investigating associations of androgens with health outcomes in men

Yeap, B. B., Marriott, R. J., Adams, R. J., Antonio, L., Ballantyne, C. M., Bhasin, S., Cawthon, P. M., Couper, D. J., Dobs, A. S., Flicker, L., Karlsson, M., Martin, S. A., Matsumoto, A. M., Mellström, D., Norman, P. E., Ohlsson, C., Orwoll, E. S., O'Neill, T. W., Shores, M. M., Travison, T. G. & 4 others, Vanderschueren, D., Wittert, G. A., Wu, F. C. W. & Murray, K., 11 May 2020, In : BMJ Open. 10, 5, e034777.

Research output: Contribution to journalArticle

An evaluation of behaviour change techniques in health and lifestyle mobile applications

Antezana, G., Venning, A., Blake, V., Smith, D., Winsall, M., Orlowski, S. & Bidargaddi, N., 1 Mar 2020, In : Health Informatics Journal. 26, 1, p. 104-113 10 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)

An examination of the quality and performance of the Alda scale for classifying lithium response phenotypes

ConLiGen collaborators, 1 May 2020, In : Bipolar Disorders. 22, 3, p. 255-265 11 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Antidepressant Drugs Correct the Imbalance Between proBDNF/p75NTR/Sortilin and Mature BDNF/TrkB in the Brain of Mice with Chronic Stress

Yang, C. R., Zhang, X. Y., Liu, Y., Du, J. Y., Liang, R., Yu, M., Zhang, F. Q., Mu, X. F., Li, F., Zhou, L., Zhou, F., Meng, F. J., Wang, S., Ming, D. & Zhou, X. F., 1 Jan 2020, In : Neurotoxicity Research. 37, 1, p. 171-182 12 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

A physician-initiated double-blind, randomised, placebo-controlled, phase 2 study evaluating the efficacy and safety of inhibition of NADPH oxidase with the first-in-class Nox-1/4 inhibitor, GKT137831, in adults with type 1 diabetes and persistently elevated urinary albumin excretion: Protocol and statistical considerations

Reutens, A. T., Jandeleit-Dahm, K., Thomas, M., Salim, A., De Livera, A. M., Bach, L. A., Colman, P. G., Davis, T. M. E., Ekinci, E. I., Fulcher, G., Hamblin, P. S., Kotowicz, M. A., MacIsaac, R. J., Morbey, C., Simmons, D., Soldatos, G., Wittert, G., Wu, T., Cooper, M. E. & Shaw, J. E., Mar 2020, In : Contemporary Clinical Trials. 90, 105892.

Research output: Contribution to journalArticle

3 Citations (Scopus)

Approaches to improve causal inference in physical activity epidemiology

Lynch, B. M., Dixon-Suen, S. C., Varela, A. R., Yang, Y., English, D. R., Ding, D., Gardiner, P. A. & Boyle, T., 1 Jan 2020, In : Journal of Physical Activity and Health. 17, 1, p. 80-84 5 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

A qualitative content analysis of retained surgical items: learning from root cause analysis investigations

Hibbert, P. D., Thomas, M. J. W., Deakin, A., Runciman, W. B., Carson-Stevens, A. & Braithwaite, J., 20 May 2020, In : International journal for quality in health care : journal of the International Society for Quality in Health Care. 32, 3, p. 184-189 6 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

A review on the biomechanics of coronary arteries

Carpenter, H. J., Gholipour, A., Ghayesh, M. H., Zander, A. C. & Psaltis, P., 1 Feb 2020, In : International Journal of Engineering Science. 147, 103201.

Research output: Contribution to journalArticle

2 Citations (Scopus)

A role for caveola-forming proteins caveolin-1 and CAVIN1 in the pro-invasive response of glioblastoma to osmotic and hydrostatic pressure

Pu, W., Qiu, J., Nassar, Z., Shaw, P. N., McMahon, K. A., Ferguson, C., Parton, R. G., Riggins, G. J., Harris, J. M. & Parat, M. O., 1 Mar 2020, In : Journal of Cellular and Molecular Medicine. 24, 6, p. 3724-3738 15 p.

Research output: Contribution to journalArticle

A simple system for measuring the level of free fatty acids in human milk collected as dried milk spot

Gao, C., Liu, G., McPhee, A. J., Miller, J. & Gibson, R. A., 1 Jul 2020, In : Prostaglandins, leukotrienes, and essential fatty acids. 158, 1 p.

Research output: Contribution to journalArticle

Assessing appropriateness of paediatric asthma management: A population-based sample survey

on behalf of the CareTrack Kids Investigative Team, 1 Jan 2020, In : Respirology. 25, 1, p. 71-79 9 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Assessing the appropriateness of paediatric antibiotic overuse in Australian children: A population-based sample survey

Arnolda, G., Hibbert, P., Ting, H. P., Molloy, C., Wiles, L., Warwick, M., Snelling, T., Homaira, N., Jaffe, A. & Braithwaite, J., 24 Apr 2020, In : BMC Pediatrics. 20, 1, 185.

Research output: Contribution to journalArticle

Assessing the appropriateness of the management of otitis media in Australia: A population-based sample survey

on behalf of the CareTrack Kids Investigative Team, 1 Feb 2020, In : Journal of Paediatrics and Child Health. 56, 2, p. 215-223 9 p.

Research output: Contribution to journalArticle

Assessing the quality of health research from an Indigenous perspective: The Aboriginal and Torres Strait Islander quality appraisal tool

Harfield, S., Pearson, O., Morey, K., Kite, E., Canuto, K., Glover, K., Gomersall, J., Carter, D., Davy, C., Aromataris, E. & Braunack-Mayer, A., 10 Apr 2020, In : BMC medical research methodology. 20, 1, 79.

Research output: Contribution to journalArticle

Association between physical activity and risk of incident arrhythmias in 402 406 individuals: evidence from the UK Biobank cohort

Elliott, A. D., Linz, D., Mishima, R., Kadhim, K., Gallagher, C., Middeldorp, M. E., Verdicchio, C. V., Hendriks, J. M. L., Lau, D. H., La Gerche, A. & Sanders, P., 14 Apr 2020, In : European Heart Journal. 41, 15, p. 1479-1486 8 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Association Between Sulfur-Metabolizing Bacterial Communities in Stool and Risk of Distal Colorectal Cancer in Men

Nguyen, L. H., Ma, W., Wang, D. D., Cao, Y., Mallick, H., Gerbaba, T. K., Lloyd-Price, J., Abu-Ali, G., Hall, A. B., Sikavi, D., Drew, D. A., Mehta, R. S., Arze, C., Joshi, A. D., Yan, Y., Branck, T., DuLong, C., Ivey, K. L., Ogino, S., Rimm, E. B. & 5 others, Song, M., Garrett, W. S., Izard, J., Huttenhower, C. & Chan, A. T., 20 Jan 2020, In : Gastroenterology.

Research output: Contribution to journalArticle

Open Access

Association of polygenic score for major depression with response to lithium in patients with bipolar disorder

Amare, A. T., Schubert, K. O., Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium, Hou, L., Clark, S. R., Papiol, S., Cearns, M., Heilbronner, U., Degenhardt, F., Tekola-Ayele, F., Hsu, Y. H., Shekhtman, T., Adli, M., Akula, N., Akiyama, K., Ardau, R., Arias, B., Aubry, J. M., Backlund, L., Bhattacharjee, A. K. & 31 others, Bellivier, F., Benabarre, A., Bengesser, S., Biernacka, J. M., Birner, A., Brichant-Petitjean, C., Cervantes, P., Chen, H. C., Chillotti, C., Cichon, S., Cruceanu, C., Czerski, P. M., Dalkner, N., Dayer, A., Del Zompo, M., DePaulo, J. R., Étain, B., Jamain, S., Falkai, P., Forstner, A. J., Frisen, L., Frye, M. A., Fullerton, J. M., Gard, S., Garnham, J. S., Goes, F. S., Grigoroiu-Serbanescu, M., Grof, P., Hashimoto, R., Hauser, J. & Herms, S., 1 Jan 2020, In : Molecular Psychiatry.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Association of Psychosocial Factors With Risk of Chronic Diseases: A Nationwide Longitudinal Study

Sahle, B. W., Chen, W., Melaku, Y. A., Akombi, B. J., Rawal, L. B. & Renzaho, A. M. N., Feb 2020, In : American Journal of Preventive Medicine. 58, 2, p. e39-e50

Research output: Contribution to journalArticle

Association of supplemental calcium and dairy milk intake with all-cause and cause-specific mortality in the UK Biobank: A prospective cohort study

Stasinopoulos, L. C., Zhou, A. & Hyppönen, E., 1 Jan 2020, In : British Journal of Nutrition. 123, 5, p. 574-582 9 p.

Research output: Contribution to journalArticle

A standardized patient-centered characterization of the phenotypic spectrum of PCDH19 girls clustering epilepsy

Kolc, K. L., Sadleir, L. G., Depienne, C., Marini, C., Scheffer, I. E., Møller, R. S., Trivisano, M., Specchio, N., Pham, D., Kumar, R., Roberts, R. & Gecz, J., 1 Dec 2020, In : Translational Psychiatry. 10, 1, 127.

Research output: Contribution to journalArticle

Atrial Fibrillation Is Associated With Syncope and Falls in Older Adults: A Systematic Review and Meta-analysis

Malik, V., Gallagher, C., Linz, D., Elliott, A. D., Emami, M., Kadhim, K., Mishima, R., Hendriks, J. M. L., Mahajan, R., Arnolda, L., Sanders, P. & Lau, D. H., 1 Apr 2020, In : Mayo Clinic Proceedings. 95, 4, p. 676-687 12 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Brain fog in postural tachycardia syndrome: an objective cerebral blood flow and neurocognitive analysis

Wells, R., Paterson, F., Bacchi, S., Page, A., Baumert, M. & Lau, D. H., 1 Jun 2020, In : Journal of Arrhythmia. 36, 3, p. 549-552 4 p.

Research output: Contribution to journalArticle

Cardiovascular disease risk assessment for Aboriginal and Torres Strait Islander adults aged under 35 years: a consensus statement

Agostino, J. W., Wong, D., Paige, E., Wade, V., Connell, C., Davey, M. E., Peiris, D. P., Fitzsimmons, D., Burgess, C. P., Mahoney, R., Lonsdale, E., Fernando, P., Malamoo, L., Eades, S., Brown, A., Jennings, G., Lovett, R. W. & Banks, E., 1 May 2020, In : Medical Journal of Australia. 212, 0025729X, p. 422-427 6 p.

Research output: Contribution to journalArticle

Categorization of adverse drug reactions in electronic health records

Foreman, C., Smith, W. B., Caughey, G. & Shakib, S., 17 Apr 2020, In : Pharmacology research & perspectives. 8, 2, p. e00550

Research output: Contribution to journalArticle

Characterisation and evaluation of the regenerative capacity of Stro-4+ enriched bone marrow mesenchymal stromal cells using bovine extracellular matrix hydrogel and a novel biocompatible melt electro-written medical-grade polycaprolactone scaffold

Black, C., Kanczler, J. M., de Andrés, M. C., White, L. J., Savi, F. M., Bas, O., Saifzadeh, S., Henkel, J., Zannettino, A., Gronthos, S., Woodruff, M. A., Hutmacher, D. W. & Oreffo, R. O. C., 1 Jul 2020, In : Biomaterials. 247, 119998.

Research output: Contribution to journalArticle

Characteristic Histopathological Findings and Cardiac Arrest Rhythm in Isolated Mitral Valve Prolapse and Sudden Cardiac Death

Han, H. C., Parsons, S. A., Teh, A. W., Sanders, P., Neil, C., Leong, T., Koshy, A. N., Vohra, J. K., Kalman, J. M., Smith, K., O'Donnell, D., Hare, D. L., Farouque, O. & Lim, H. S., 7 Apr 2020, In : Journal of the American Heart Association. 9, 7, p. e015587

Research output: Contribution to journalArticle

1 Citation (Scopus)

Characteristic Histopathological Findings and Cardiac Arrest Rhythm in Isolated Mitral Valve Prolapse and Sudden Cardiac Death

Han, H. C., Parsons, S. A., Teh, A. W., Sanders, P., Neil, C., Leong, T., Koshy, A. N., Vohra, J. K., Kalman, J. M., Smith, K., O'Donnell, D., Hare, D. L., Farouque, O. & Lim, H. S., 7 Apr 2020, In : Journal of the American Heart Association. 9, 7, p. e015587

Research output: Contribution to journalArticle

Chloroquine and bafilomycin A mimic lysosomal storage disorders and impair mTORC1 signalling

Fedele, A. O. & Proud, C., Apr 2020, In : Bioscience Reports. 40, 4, BSR20200905.

Research output: Contribution to journalArticle

Chromatin-Binding Protein PHF6 Regulates Activity-Dependent Transcriptional Networks to Promote Hunger Response

Gan, L., Sun, J., Yang, S., Zhang, X., Chen, W., Sun, Y., Wu, X., Cheng, C., Yuan, J., Li, A., Corbett, M. A., Dixon, M. P., Thomas, T., Voss, A. K., Gecz, J., Wang, G. Z., Bonni, A., Li, Q. & Huang, J., 17 Mar 2020, In : Cell Reports. 30, 11, p. 3717-3728.e6

Research output: Contribution to journalArticle

Colonic microbiota is associated with inflammation and host epigenomic alterations in inflammatory bowel disease

Ryan, F. J., Ahern, A. M., Fitzgerald, R. S., Laserna-Mendieta, E. J., Power, E. M., Clooney, A. G., O’Donoghue, K. W., McMurdie, P. J., Iwai, S., Crits-Christoph, A., Sheehan, D., Moran, C., Flemer, B., Zomer, A. L., Fanning, A., O’Callaghan, J., Walton, J., Temko, A., Stack, W., Jackson, L. & 6 others, Joyce, S. A., Melgar, S., DeSantis, T. Z., Bell, J. T., Shanahan, F. & Claesson, M. J., 1 Dec 2020, In : Nature Communications. 11, 1, 1512.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Complex interaction of obesity, intentional weight loss and heart failure: A systematic review and meta-analysis

Mahajan, R., Stokes, M., Elliott, A., Munawar, D. A., Khokhar, K. B., Thiyagarajah, A., Hendriks, J., Linz, D., Gallagher, C., Kaye, D., Lau, D. & Sanders, P., 1 Jan 2020, In : Heart. 106, 1, p. 58-68 11 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)

Composition of nocturnal hypoxaemic burden and its prognostic value for cardiovascular mortality in older community-dwelling men

Baumert, M., Immanuel, S. A., Stone, K. L., Harrison, S. L., Redline, S., Mariani, S., Sanders, P., Doug McEvoy, R. & Linz, D., 21 Jan 2020, In : European Heart Journal. 41, 4, p. 533-541 9 p.

Research output: Contribution to journalArticle

10 Citations (Scopus)

Comprehensive geriatric assessment predicts azacitidine treatment duration and survival in older patients with myelodysplastic syndromes

Molga, A., Wall, M., Chhetri, R., Wee, L. Y., Singhal, D., Edwards, S., Singhal, N., Ross, D., To, L. B., Caughey, G., Shakib, S., Germing, U., To, T. & Hiwase, D., 1 Jan 2020, In : Journal of Geriatric Oncology. 11, 1, p. 114-120 7 p.

Research output: Contribution to journalArticle

8 Citations (Scopus)

Computerised cognitive training to improve cognition including delirium following coronary artery bypass grafting surgery: Protocol for a blinded randomised controlled trial

Greaves, D., Psaltis, P., Lampit, A., Davis, D. H. J., Smith, A. E., Bourke, A., Worthington, M. G., Valenzuela, M. J. & Keage, H. A. D., 5 Feb 2020, In : BMJ Open. 10, 2, e034551.

Research output: Contribution to journalArticle

Computerized adaptive tests: Efficient and precise assessment of the patient-centered impact of diabetic retinopathy

Fenwick, E. K., Barnard, J., Gan, A., Loe, B. S., Khadka, J., Pesudovs, K., Man, R., Lee, S. Y., Tan, G., Wong, T. Y. & Lamoureux, E. L., Jun 2020, In : Translational Vision Science and Technology. 9, 7, 3.

Research output: Contribution to journalArticle

Open Access

Constraint and conservation of paired-type homeodomains predicts the clinical outcome of missense variants of uncertain significance

Thai, M. H. N., Gardner, A., Redpath, L., Mattiske, T., Dearsley, O., Shaw, M., Vulto-van Silfhout, A. T., Pfundt, R., Dixon, J., McGaughran, J., Pérez-Jurado, L. A., Gécz, J. & Shoubridge, C., 1 Jan 2020, (Accepted/In press) In : Human Mutation.

Research output: Contribution to journalArticle

Consumption of sugar-sweetened beverages, juice, artificially-sweetened soda and bottled water: An Australian population study

Miller, C., Ettridge, K., Wakefield, M., Pettigrew, S., Coveney, J., Roder, D., Durkin, S., Wittert, G., Martin, J. & Dono, J., 1 Mar 2020, In : Nutrients. 12, 3, 817.

Research output: Contribution to journalArticle

1 Citation (Scopus)