South Australian Health and Medical Research Institute

  • North Terrace

    5000 Adelaide

Research Output 1968 2020

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Conference contribution
2019

Poster: A smartphone-based behavioural activation application using recommender system

Zhang, T., Jarrad, G., Murphy, S. A. & Bidargaddi, N., 9 Sep 2019, UbiComp/ISWC 2019- - Adjunct Proceedings of the 2019 ACM International Joint Conference on Pervasive and Ubiquitous Computing and Proceedings of the 2019 ACM International Symposium on Wearable Computers. Association for Computing Machinery, Inc, p. 250-253 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2018

Insulin resistance and systemic metabolic responses during an oral glucose tolerance test in 5,340 individuals

Makinen, V-P., Wang, Q. & Ala-Korpela, M., 2018, Insulin resistance and systemic metabolic responses during an oral glucose tolerance test in 5,340 individuals.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

File

Self Perceived Health in Women with Polycystic Ovary Syndrome

Avery, J., Moran, L. J. & Rumbold, A., 2018, 16th Annual Meeting of the Androgen Excess and PCOS Society (AEPCOS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Systems to harness digital footprint to elucidate and facilitate ageing in place

Knight, A., Fouyaxis, J., Jarrad, G., Beski, K., Cho, G. & Bidargaddi, N., 1 Jan 2018, Telehealth for our Ageing Society - Selected Papers from Global Telehealth 2017. van den Berg, M. E. L. & Maeder, A. J. (eds.). IOS Press, p. 91-101 11 p. (Studies in Health Technology and Informatics; vol. 246).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2017

Automating the identification of patient safety incident reports using multi-label classification

Wang, Y., Coiera, E., Runciman, W. & Magrabi, F., 1 Jan 2017, MEDINFO 2017: Precision Healthcare through Informatics - Proceedings of the 16th World Congress on Medical and Health Informatics. Dongsheng, Z., Gundlapalli, A. V. & Marie-Christine, J. (eds.). IOS Press, p. 609-613 5 p. (Studies in Health Technology and Informatics; vol. 245).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2016

Biosensors for detecting stress in developing embryos

Purdey, M. S., Saini, A., McLennan, H. J., Pullen, B. J., Schartner, E. P., Sutton-Mcdowall, M. L., Thompson, J. G., Monro, T. M., Nicholls, S. J. & Abell, A. D., 1 Jan 2016, SPIE BioPhotonics Australasia. Goldys, E. M. & Hutchinson, M. R. (eds.). SPIE, Vol. 10013. 100130B

Research output: Chapter in Book/Report/Conference proceedingConference contribution

7 Citations (Scopus)

Construction of a neonatal cortical surface atlas using multimodal surface matching

Bozek, J., Fitzgibbon, S., Wright, R., Rueckert, D., Jenkinson, M. & Robinson, E. C., 15 Jun 2016, 2016 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2016 - Proceedings. IEEE Computer Society, Vol. 2016-June. p. 775-778 4 p. 7493381

Research output: Chapter in Book/Report/Conference proceedingConference contribution

7 Citations (Scopus)

Imaging blood vessels and lymphatic vessels in the zebrafish

Jung, H. M., Isogai, S., Kamei, M., Castranova, D., Gore, A. V. & Weinstein, B. M., 1 Jan 2016, The Zebrafish Cellular and Developmental Biology, Part A Cellular Biology, 2016. Zon, L. I., Detrich, H. W. & Westerfield, M. (eds.). Academic Press Inc., p. 69-103 35 p. (Methods in Cell Biology; vol. 133).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Label-free assessment of endothelial cell metabolic state using autofluorescent microscopy

Pullen, B. J., Nguyen, T., Gosnell, M., Anwer, A. G., Goldys, E., Nicholls, S. J. & Psaltis, P. J., 2016, SPIE BioPhotonics Australasia. SPIE, Vol. 10013. 100133F

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)

Using whispering gallery mode micro lasers for biosensing within undiluted serum

Reynolds, T., François, A., Riesen, N., Turvey, M. E., Nicholls, S. J., Hoffmann, P. & Monro, T. M., 2016, SPIE BioPhotonics Australasia. SPIE, Vol. 10013. 100132X

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2015

Optimization of whispering gallery mode sensor design for applications in biosensing

Reynolds, T., François, A., Henderson, M. R., Nicholls, S. J. & Monro, T. M., 1 Jan 2015, Design and Quality for Biomedical Technologies VIII. Liang, R. & Raghavachari, R. (eds.). SPIE, Vol. 9315. 93150K

Research output: Chapter in Book/Report/Conference proceedingConference contribution

5 Citations (Scopus)

The HealthierU Portal for Supporting Behaviour Change and Diet Programs

Berkovsky, S., Hendrie, G., Freyne, J., Noakes, M. & Usic, K., 2015, Driving Reform: Digital Health is Everyone's Business - Selected Papers from the 23rd Australian National Health Informatics Conference, HIC 2015. IOS Press, Vol. 214. p. 15-21 7 p. (Studies in Health Technology and Informatics; vol. 214).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2014
4 Citations (Scopus)

A demonstration of multiplex biosensing using whispering gallery mode microspheres positioned onto a microstructured optical fiber tip

Reynolds, T., François, A., Nicholls, S. J. & Monro, T. M., 1 Jan 2014, Optical Diagnostics and Sensing XIV: Toward Point-of-Care Diagnostics. SPIE, Vol. 8951. 895110

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nitric oxide sensitive optic fiber sensor based on immobilized ruthenium(II) complex

Zhang, P., Ruan, S., Zhang, R., Pullen, B., Zhang, X., Purdey, M. S., Ebendorff-Heidepriem, H., Abell, A., Ding, L., Tang, M. & Ruan, Y., 21 Jul 2014, Asia-Pacific Optical Sensors Conference, APOS 2016. OSA - The Optical Society

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2013
2 Citations (Scopus)

Combining whispering gallery mode lasers and microstructured optical fibers for in-vivo biosensing applications

Francois, A., Rowland, K. J., Reynolds, T., Nicholls, S. J. & Monro, T. M., 2013, Photonics North 2013. Vol. 8915. 891518

Research output: Chapter in Book/Report/Conference proceedingConference contribution

13 Citations (Scopus)

Edge- and detail-preserving sparse image representations for deformable registration of chest MRI and CT volumes

Heinrich, M. P., Jenkinson, M., Papiez, B. W., Glesson, F. V., Brady, S. M. & Schnabel, J. A., 12 Jul 2013, Information Processing in Medical Imaging - 23rd International Conference, IPMI 2013, Proceedings. p. 463-474 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7917 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

21 Citations (Scopus)

Multimodal surface matching: Fast and generalisable cortical registration using discrete optimisation

Robinson, E. C., Jbabdi, S., Andersson, J., Smith, S., Glasser, M. F., Van Essen, D. C., Burgess, G., Harms, M. P., Barch, D. M. & Jenkinson, M., 12 Jul 2013, Information Processing in Medical Imaging - 23rd International Conference, IPMI 2013, Proceedings. p. 475-486 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7917 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Solving the problems of inspection planning under parametric uncertainty of underlying models

Nechval, N. A., Nechval, K. N., Purgailis, M., Rozevskis, U., Danovich, V., Ribakova, N., Strelchonok, V. F. & Moldovan, M., 1 Jan 2013, 7th IFAC Conference on Manufacturing Modelling, Management, and Control, MIM 2013 - Proceedings. 9 ed. IFAC Secretariat, Vol. 46. p. 489-494 6 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

70 Citations (Scopus)

Towards realtime multimodal fusion for image-guided interventions using self-similarities

Heinrich, M. P., Jenkinson, M., Papiez, B. W., Brady, S. M. & Schnabel, J. A., 23 Oct 2013, Medical Image Computing and Computer-Assisted Intervention, MICCAI 2013 - 16th International Conference, Proceedings. PART 1 ed. p. 187-194 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 8149 LNCS, no. PART 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2012
12 Citations (Scopus)

FinIS: Improved in silico finishing using an exact quadratic programming formulation

Gao, S., Bertrand, D. & Nagarajan, N., 1 Oct 2012, Algorithms in Bioinformatics - 12th International Workshop, WABI 2012, Proceedings. p. 314-325 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7534 LNBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2 Citations (Scopus)

Immunomodulatory cationic peptide therapeutics: A new paradigm in infection and immunity

Mookherjee, N., Chow, L. N. Y. & Hancock, R., 1 Jan 2012, Small Wonders: Peptides for Disease Control. American Chemical Society, p. 1-19 19 p. (ACS Symposium Series; vol. 1095).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)

Joint symbolic dynamics as an effective approach for quantification of cardio-respiratory interaction in patients with obstructive sleep apnea syndrome

Kabir, M. M., Dimitri, H., Sanders, P., Abbott, D. & Baumert, M., 1 Dec 2012, 2012 7th International Conference on Electrical and Computer Engineering, ICECE 2012. p. 133-136 4 p. 6471503

Research output: Chapter in Book/Report/Conference proceedingConference contribution

6 Citations (Scopus)

Textural mutual information based on cluster trees for multimodal deformable registration

Heinrich, M. P., Jenkinson, M., Brady, S. M. & Schnabel, J. A., 15 Aug 2012, 2012 9th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2012 - Proceedings. p. 1471-1474 4 p. 6235849

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2011
8 Citations (Scopus)

Climate effects and temperature thresholds for eucalypt flowering: A GAMLSS ZIP approach

Hudson, I. L., Kim, S. & Keatley, M. R., 1 Dec 2011, MODSIM 2011 - 19th International Congress on Modelling and Simulation - Sustaining Our Future: Understanding and Living with Uncertainty. p. 2647-2653 7 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

20 Citations (Scopus)

Expression and function of TRP channels in liver cells

Rychkov, G. Y. & Barritt, G. J., 15 Dec 2011, Transient Receptor Potential Channels. Islam, S. & Islam, S. (eds.). p. 667-686 20 p. (Advances in Experimental Medicine and Biology; vol. 704).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Fabrication of depressed cladding waveguide Bragg-gratings in rare-earth doped heavy-metal fluoride glass

Gross, S., Lancaster, D. G., Ebendorff-Heidepriem, H., Kuan, K., Monro, T. M., Withford, M. J. & Fuerbach, A., 6 Sep 2011, 2011 Conference on Lasers and Electro-Optics Europe and 12th European Quantum Electronics Conference, CLEO EUROPE/EQEC 2011. 5943324

Research output: Chapter in Book/Report/Conference proceedingConference contribution

13 Citations (Scopus)

Opera: Reconstructing optimal genomic scaffolds with high-throughput paired-end sequences

Gao, S., Nagarajan, N. & Sung, W. K., 4 Apr 2011, Research in Computational Molecular Biology - 15th Annual International Conference, RECOMB 2011, Proceedings. p. 437-451 15 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6577 LNBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)

Quantification of cardio-respiratory interactions in patients with mild obstructive sleep apnea syndrome using joint symbolic dynamics

Kabir, M. M., Dimitri, H., Sanders, P., Antic, R., Abbott, D. & Baumert, M., 2011, Computing in Cardiology 2011, CinC 2011. Vol. 38. p. 41-44 4 p. 6164497

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Single photon emission from nanodiamond in tellurite glass

Gibson, B. C., Henderson, M. R., Ebendorff-Heidepriem, H., Kuan, K., Afshar, V. S., Orwa, J. O., Aharonovich, I., Tomljenovic-Hanic, S., Prawer, S., Monro, T. M. & Greentree, A. D., 2011, International Quantum Electronics Conference, IQEC 2011. p. 721-722 2 p. 6193950

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2010
5 Citations (Scopus)

A framework for SQL-based mining of large graphs on relational databases

Srihari, S., Chandrashekar, S. & Parthasarathy, S., 1 Dec 2010, Advances in Knowledge Discovery and Data Mining - 14th Pacific-Asia Conference, PAKDD 2010, Proceedings. PART 2 ed. p. 160-167 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6119 LNAI, no. PART 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Citations (Scopus)

Evaluation of hippocampal segmentation methods for healthy and pathological subjects

Bishopy, C. A., Jenkinson, M., Declerck, J. & Merhof, D., 1 Dec 2010, EG VCBM 2010 - Eurographics Workshop on Visual Computing for Biology and Medicine. p. 17-24 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2009
2 Citations (Scopus)

An improved genetic algorithm for solving conic fitting problems

Gao, S. & Chunping, L., 2009, 2009 WRI World Congress on Computer Science and Information Engineering, CSIE 2009. Vol. 4. p. 800-804 5 p. 5171106

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)

A novel measurement system for cardiac flow analysis applied to phase contrast magnetic resonance imaging of the heart

Wong, K. K. L., Kelso, R. M., Worthley, S. G., Sanders, P., Mazumdar, J. & Abbott, D., 2009, World Congress on Medical Physics and Biomedical Engineering: Diagnostic Imaging. 2 ed. Vol. 25. p. 596-599 4 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

6 Citations (Scopus)

Atlas-based improved prediction of magnetic field inhomogeneity for distortion correction of EPI data

Poynton, C., Jenkinson, M. & Wells, W., 1 Dec 2009, Medical Image Computing and Computer-Assisted Intervention - MICCAI2009 - 12th International Conference, Proceedings. PART 2 ed. p. 951-959 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5762 LNCS, no. PART 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

16 Citations (Scopus)

Climatic influences on the flowering phenology of four Eucalypts: A GAMLSS approach

Hudson, I. L., Kim, S. & Keatley, M. R., 1 Dec 2009, 18th World IMACS Congress and MODSIM09 International Congress on Modelling and Simulation: Interfacing Modelling and Simulation with Mathematical and Computational Sciences, Proceedings. p. 2611-2617 7 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

6 Citations (Scopus)

Complex network model for software system and complexity measurement

Gao, S. & Chunping, L., 2009, 2009 WRI World Congress on Computer Science and Information Engineering, CSIE 2009. Vol. 7. p. 624-628 5 p. 5170394

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)

Determination of 6-minute walk test using accelerometer-based ambulatory monitoring device for the assessment of patient's progress in cardiac rehabilitation

Karunanithi, M., Bidargaddi, N. & Sarela, A., 1 Dec 2009, World Congress on Medical Physics and Biomedical Engineering: Diagnostic and Therapeutic Instrumentation, Clinical Engineering. 7 ed. Vol. 25. p. 540-542 3 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Flow Imaging and Validation of MR Fluid Motion Tracking

Wong, K. K. L., Kelso, R. M., Worthley, S. G., Sanders, P., Mazumdar, J. & Abbott, D., 1 Dec 2009, 13th International Conference on Biomedical Engineering - ICBME 2008. Vol. 23. p. 569-573 5 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

9 Citations (Scopus)

Modelling the flowering of four eucalypts species via MTDg with interactions

Kim, S., Hudson, I. L. & Keatley, M. R., 1 Dec 2009, 18th World IMACS Congress and MODSIM09 International Congress on Modelling and Simulation: Interfacing Modelling and Simulation with Mathematical and Computational Sciences, Proceedings. p. 2625-2631 7 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

The characterisation of blood rotation in a human heart chamber based on statistical analysis of vorticity maps

Wong, K. K. L., Kelso, R. M., Worthley, S. G., Sanders, P., Mazumdar, J. & Abbott, D., 2009, Biomedical Applications of Micro- and Nanoengineering IV and Complex Systems. Vol. 7270.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)

The positive effects of negative information: Extending one-class classification models in binary proteomic sequence classification

Mutter, S., Pfahringer, B. & Holmes, G., 1 Dec 2009, AI 2009: Advances in Artificial Intelligence - 22nd Australasian Joint Conference, Proceedings. p. 260-269 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5866 LNAI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2008
2 Citations (Scopus)

A software architecture and data model for community-based healthcare environments

Sarela, A., Bidargaddi, N. & Karunanithi, M., 25 Sep 2008, Proceedings of the 2nd International Conference on Pervasive Computing Technologies for Healthcare 2008, PervasiveHealth. p. 161-164 4 p. 4571059

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Citations (Scopus)

Detecting hubs and quasi cliques in scale-free networks

Srihari, S., Ng, H. K., Ning, K. & Leong, H. W., 1 Dec 2008, 2008 19th International Conference on Pattern Recognition, ICPR 2008. 4761232

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Flow in left atrium using MR fluid motion estimation

Wong, K. K. L., Kelso, R. M., Worthley, S. M., Sanders, P., Mazumdar, J. & Abbott, D., 31 Mar 2008, Complex Systems II. Vol. 6802. 68021H

Research output: Chapter in Book/Report/Conference proceedingConference contribution

9 Citations (Scopus)

Parameterized algorithms for generalized domination

Raman, V., Saurabh, S. & Srihari, S., 22 Sep 2008, Combinatorial Optimization and Applications - Second International Conference, COCOA 2008, Proceedings. p. 116-126 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5165 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Citations (Scopus)

Propositionalisation of Profile Hidden Markov Models for biological sequence analysis

Mutter, S., Pfahringer, B. & Holmes, G., 1 Dec 2008, AI 2008: Advances in Artificial Intelligence - 21st Australasian Joint Conference on Artificial Intelligence, Proceedings. p. 278-288 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 5360 LNAI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2007

Blood flow assessment in a heart with septal defect based on optical flow analysis of magnetic resonance images

Wong, K., Kuklik, P., Kelso, R. M., Worthley, S. G., Sanders, P., Mazumdar, J. & Abbott, D., 30 Apr 2007, Biomedical Applications of Micro- and Nanoengineering III. Vol. 6416. 64160L

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Embracing standard treatment manuals: Information transfer to primary health workers in papua new guinea

Davy, C., 1 Jan 2007, Information Technology in Health Care 2007 - Proceedings of the 3rd International Conference on Information Technology in Health Care: Socio-Technical Approaches. IOS Press, p. 23-35 13 p. (Studies in Health Technology and Informatics; vol. 130).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

4 Citations (Scopus)

Motion estimation of vortical blood flow within the right atrium in a patient with atrial septal defect

Wong, K. K. L., Molaee, P., Kuklik, P., Kelso, R. M., Worthley, S. G., Sanders, P., Mazumdar, J. & Abbott, D., 1 Dec 2007, 2007 IEEE/ICME International Conference on Complex Medical Engineering, CME 2007. p. 862-869 8 p. 4381864

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Citation (Scopus)

Tracking indices as measures of synchronization of isotopic temperature of NZ abalone shells with ambient water temperature

Kim, S. & Hudson, I. L., 1 Dec 2007, MODSIM07 - Land, Water and Environmental Management: Integrated Systems for Sustainability, Proceedings. p. 511-517 7 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution