Research Output 1976 2019

2019

Acute colitis drives tolerance by persistently altering the epithelial barrier and innate and adaptive immunity

Wardill, H. R., Choo, J., Dmochowska, N., Mavrangelos, C., Campaniello, M. A., Bowen, J. M., Rogers, G. & Hughes, P. A., 18 Jun 2019, In : Inflammatory Bowel Diseases. 25, 7, p. 1196-1207 12 p.

Research output: Contribution to journalArticle

A genome-wide knockout screen in human macrophages idetified host factors modulating Salmonella infection

Yeung, A. T. Y., Choi, Y. H., Lee, A. H. Y., Hale, C., Ponstingl, H., Pickard, D., Goulding, D., Thomas, M., Gill, E., Kim, J. K., Bradley, A., Hancock, R. & Dougana, G., 1 Jan 2019, In : mBio. 10, 5, e02169-19.

Research output: Contribution to journalArticle

Alpha-Blockers as colorectal cancer chemopreventive: Findings from a case-control study, human cell cultures, and in vivo preclinical testing

Suzuki, N., Niikura, R., Ihara, S., Hikiba, Y., Kinoshita, H., Higashishima, N., Hayakawa, Y., Yamada, A., Hirata, Y., Nakata, R., Okamoto, M., Sano, M., Kushiyama, A., Suzuki Ichinose, M., Woods, S., Worthley, D., Iwamoto, Y. & Koike, K., 1 Mar 2019, In : Cancer Prevention Research. 12, 3, p. 185-194 10 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

An analysis of a multiple biomarker panel to better predict prostate cancer metastasis after radical prostatectomy

Zhang, A. Y., Chiam, K., Haupt, Y., Fox, S., Birch, S., Tilley, W., Butler, L. M., Knudsen, K., Comstock, C., Rasiah, K., Grogan, J., Mahon, K. L., Bianco-Miotto, T., Ricciardelli, C., Böhm, M., Henshall, S., Delprado, W., Stricker, P., Horvath, L. G. & Kench, J. G., 1 Mar 2019, In : International Journal of Cancer. 144, 5, p. 1151-1159 9 p.

Research output: Contribution to journalArticle

A network analysis of biomarkers for type 2 diabetes

Huang, T., Glass, K., Zeleznik, O. A., Kang, J. H., Ivey, K., Sonawane, A. R., Birmann, B. M., Hersh, C. P., Hu, F. B. & Tworoger, S. S., 1 Feb 2019, In : Diabetes. 68, 2, p. 281-290 10 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

A niche-dependent myeloid transcriptome signature defines dormant myeloma cells

Khoo, W. H., Ledergor, G., Weiner, A., Roden, D. L., Terry, R. L., McDonald, M. M., Chai, R. C., De Veirman, K., Owen, K. L., Opperman, K. S., Vandyke, K., Clark, J. R., Seckinger, A., Kovacic, N., Nguyen, A., Mohanty, S. T., Pettitt, J. A., Xiao, Y., Corr, A. P., Seeliger, C. & 14 othersNovotny, M., Lasken, R. S., Nguyen, T. V., Oyajobi, B. O., Aftab, D., Swarbrick, A., Parker, B., Hewett, D., Hose, D., Vanderkerken, K., Zannettino, A., Amit, I., Phan, T. G. & Croucher, P. I., 4 Jul 2019, In : Blood. 134, 1, p. 30-43 14 p.

Research output: Contribution to journalArticle

Application of machine learning techniques for creating urban microbial fingerprints

Ryan, F., 16 Aug 2019, In : Biology Direct. 14, 1, 13.

Research output: Contribution to journalArticle

1 Citation (Scopus)

A Y-chromosome shredding gene drive for controlling pest vertebrate populations

Prowse, T. A., Adikusuma, F., Cassey, P., Thomas, P. & Ross, J. V., 1 Feb 2019, In : eLife. 8, e41873.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Azacitidine with or without lenalidomide in higher risk myelodysplastic syndrome & low blast acute myeloid leukemia

Kenealy, M., Hertzberg, M., Benson, W., Taylor, K., Cunningham, I., Stevenson, W., Hiwase, D., Eek, R., Zantomio, D., Jong, S., Wall, M., Blombery, P., Gerber, T., Debrincat, M., Zannino, D. & Seymour, J. F., 31 Mar 2019, In : Haematologica. 104, 4, p. 700-709 10 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Bacterial viability in faecal transplants: Which bacteria survive?

Papanicolas, L. E., Choo, J., Wang, Y., Leong, L. E. X., Costello, S. P., Gordon, D. L., Wesselingh, S. & Rogers, G., 1 Mar 2019, In : EBioMedicine. 41, p. 509-516 8 p.

Research output: Contribution to journalArticle

Barriers and opportunities experienced by staff when implementing infection prevention and control guidelines during labour and delivery in health care facilities in Nigeria

Buxton, H., Flynn, E., Oluyinka, O., Cumming, O., EstevesMills, J., Shiras, T., Sara, S. & Dreibelbis, R., 5 Aug 2019, In : Journal of Hospital Infection.

Research output: Contribution to journalArticle

1 Citation (Scopus)

B Part of It study: a longitudinal study to assess carriage of Neisseria meningitidis in first year university students in South Australia

McMillan, M., Walters, L., Mark, T., Lawrence, A., Leong, L. E. X., Sullivan, T., Rogers, G., Andrews, R. M. & Marshall, H. S., 3 Apr 2019, In : Human Vaccines and Immunotherapeutics. 15, 4, p. 987-994 8 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Cancer-associated fibroblasts—heroes or villains?

Gieniec, K. A., Butler, L., Worthley, D. & Woods, S. L., 13 Aug 2019, In : British Journal of Cancer. 121, 4, p. 293-302 10 p.

Research output: Contribution to journalReview article

8 Citations (Scopus)

Cancer-associated fibroblasts in gastrointestinal cancer

Kobayashi, H., Enomoto, A., Woods, S., Burt, A. D., Takahashi, M. & Worthley, D., 1 May 2019, In : Nature Reviews Gastroenterology and Hepatology. 16, 5, p. 282-295 14 p.

Research output: Contribution to journalReview article

4 Citations (Scopus)

Capturing variation impact on molecular interactions in the IMEx Consortium mutations data set

del-Toro, N., Duesbury, M., Koch, M., Perfetto, L., Shrivastava, A., Ochoa, D., Wagih, O., Piñero, J., Kotlyar, M., Pastrello, C., Beltrao, P., Furlong, L. I., Jurisica, I., Hermjakob, H., Orchard, S., Porras, P., Khadake, J., Meldal, B., Panni, S., Thorneycroft, D. & 23 othersvan Roey, K., Abbani, S., Salwinski, L., Pellegrini, M., Iannuccelli, M., Licata, L., Cesareni, G., Roechert, B., Bridge, A., Ammari, M. G., McCarthy, F., Broackes-Carter, F., Campbell, N. H., Melidoni, A. N., Rodriguez-Lopez, M., Lovering, R. C., Jagannathan, S., Chen, C., Lynn, D. J., Ricard-Blum, S., Mahadevan, U., Raghunath, A. & authors, IME. C. C., 2019, In : Nature Communications. 10, 1

Research output: Contribution to journalArticle

Case report: Identification of intra-laboratory blood culture contamination with Staphylococcus aureus by whole genome sequencing

Ashokan, A., Papanicolas, L. E., Leong, L. E. X., Theodossi, M., Daniel, S., Wesselingh, S., Rogers, G. & Gordon, D. L., 1 Aug 2019, In : Diagnostic Microbiology and Infectious Disease. 94, 4, p. 331-333 3 p.

Research output: Contribution to journalArticle

Ceasing exercise induces depression-like, anxiety-like, and impaired cognitive-like behaviours and altered hippocampal gene expression

Morgan, J. A., Singhal, G., Corrigan, F., Jaehne, E. J., Jawahar, M. C., Breen, J., Pederson, S. & Baune, B. T., 1 May 2019, In : Brain Research Bulletin. 148, p. 118-130 13 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Characterization of host responses during pseudomonas aeruginosa acute infection in the lungs and blood and after treatment with the synthetic immunomodulatory peptide IDR-1002

Wuerth, K., Lee, A. H. Y., Falsafi, R., Gill, E. E. & Hancock, R., 1 Jan 2019, In : Infection and Immunity. 87, 1, e00661.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Choice of assembly software has a critical impact on virome characterisation

Sutton, T. D. S., Clooney, A. G., Ryan, F., Ross, R. P. & Hill, C., 28 Jan 2019, In : Microbiome. 7, 1, 12.

Research output: Contribution to journalArticle

Clodronate-Liposome Mediated Macrophage Depletion Abrogates Multiple Myeloma Tumor Establishment In Vivo

Opperman, K. S., Vandyke, K., Clark, K. C., Coulter, E. A., Hewett, D. R., Mrozik, K. M., Schwarz, N., Evdokiou, A., Croucher, P. I., Psaltis, P., Noll, J. E. & Zannettino, A., 1 Aug 2019, In : Neoplasia (United States). 21, 8, p. 777-787 11 p.

Research output: Contribution to journalArticle

Compound mutations in CML—imaginary bogeyman or real arch-nemesis?

Yeung, D., 1 Jun 2019, In : Leukemia Research. 81, p. 102-104 3 p.

Research output: Contribution to journalEditorial

Comprehensive geriatric assessment predicts azacitidine treatment duration and survival in older patients with myelodysplastic syndromes

Molga, A., Wall, M., Chhetri, R., Wee, L. Y., Singhal, D., Edwards, S., Singhal, N., Ross, D., To, L. B., Caughey, G., Shakib, S., Germing, U., To, T. & Hiwase, D., 1 Jan 2019, In : Journal of Geriatric Oncology.

Research output: Contribution to journalArticle

Controlling biofilm formation with nitroxide functional surfaces

Woehlk, H., Trimble, M. J., Mansour, S. C., Pletzer, D., Trouillet, V., Welle, A., Barner, L., Hancock, R., Barner-Kowollik, C. & Fairfull-Smith, K. E., 21 Aug 2019, In : Polymer Chemistry. 10, 31, p. 4252-4258 7 p.

Research output: Contribution to journalArticle

Correction: Dietary Gluten Intake and Risk of Microscopic Colitis Among US Women Without Celiac Disease: A Prospective Cohort Study

Liu, P. H., Lebwohl, B., Burke, K. E., Ivey, K., Ananthakrishnan, A. N., Lochhead, P., Olen, O., Ludvigsson, J. F., Richter, J. M., Chan, A. T. & Khalili, H., 1 May 2019, In : The American journal of gastroenterology. 114, 5, 1 p.

Research output: Contribution to journalArticle

Correlation of the invasive potential of glioblastoma and expression of caveola-forming proteins caveolin-1 and CAVIN1

Pu, W., Nassar, Z., Khabbazi, S., Xie, N., McMahon, K. A., Parton, R. G., Riggins, G. J., Harris, J. M. & Parat, M. O., 1 Jun 2019, In : Journal of Neuro-Oncology. 143, 2, p. 207-220 14 p.

Research output: Contribution to journalArticle

Craniofacial abnormalities in a murine model of Saethre-Chotzen Syndrome

Lonsdale, S., Yong, R., Khominsky, A., Mihailidis, S., Townsend, G., Ranjitkar, S. & Anderson, P., 1 Sep 2019, In : Annals of Anatomy. 225, p. 33-41 9 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Data mining for mutation-specific targets in acute myeloid leukemia

Benard, B., Gentles, A. J., Köhnke, T., Majeti, R. & Thomas, D., 1 Apr 2019, In : Leukemia. 33, 4, p. 826-843 18 p.

Research output: Contribution to journalReview article

2 Citations (Scopus)

De novo UBE2A mutations are recurrently acquired during chronic myeloid leukemia progression and interfere with myeloid differentiation pathways

Magistroni, V., Mauri, M., D'Aliberti, D., Mezzatesta, C., Crespiatico, I., Nava, M., Fontana, D., Sharma, N., Parker, W., Schreiber, A., Yeung, D., Pirola, A., Readelli, S., Massimino, L., Wang, P., Khandelwal, P., Citterio, S., Viltadi, M., Bombelli, S., Rigolio, R. & 8 othersPerego, R., Boultwood, J., Morotti, A., Saglio, G., Kim, D. W., Branford, S., Gambacorti-Passerini, C. & Piazza1, R., 31 Aug 2019, In : Haematologica. 104, 9, p. 1789-1797 9 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Design and Assessment of Anti-Biofilm Peptides: Steps Toward Clinical Application

Dostert, M., Belanger, C. R. & Hancock, R., 1 Apr 2019, In : Journal of Innate Immunity. 11, 3, p. 193-204 12 p.

Research output: Contribution to journalReview article

Differential gene expression in the mesocorticolimbic system of innately high- and low-impulsive rats

Moloney, G. M., van Oeffelen, W. E. P. A., Ryan, F., van de Wouw, M., Cowan, C., Claesson, M. J., Schellekens, H., Dinan, T. G. & Cryan, J. F., 17 May 2019, In : Behavioural Brain Research. 364, p. 193-204 12 p.

Research output: Contribution to journalArticle

Do we really understand how faecal microbiota transplantation works? Authors' reply

Papanicolas, L. E., Wesselingh, S. & Rogers, G., 1 Apr 2019, In : EBioMedicine. 42, 1 p.

Research output: Contribution to journalComment/debate

5 Citations (Scopus)

Dynamic molecular changes during the first week of human life follow a robust developmental trajectory

The EPIC Consortium, 1 Dec 2019, In : Nature communications. 10, 1, 1092.

Research output: Contribution to journalArticle

Effect of Long-term Exposure to Peptides on Mono- and Multispecies Biofilms in Dentinal Tubules

Huang, X., Haapasalo, M., Wang, Z., Hancock, R., Wei, X. & Shen, Y., 1 Jan 2019, In : Journal of Endodontics.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Effects of almond consumption on metabolic function and liver fat in overweight and obese adults with elevated fasting blood glucose: A randomised controlled trial

Bowen, J., Luscombe-Marsh, N. D., Stonehouse, W., Tran, C., Rogers, G., Johnson, N., Thompson, C. H. & Brinkworth, G. D., 1 Apr 2019, In : Clinical Nutrition ESPEN. 30, p. 10-18 9 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)
Open Access

Examining the evidence for an adult healthy middle ear Microbiome

Jervis-Bardy, J., Leong, L. E. X., Papanicolas, L. E., Ivey, K., Chawla, S., Woods, C. M., Frauenfelder, C., Ooi, E. H. & Rogers, G., 1 Jan 2019, In : mSphere. 4, 5, e00456-19.

Research output: Contribution to journalArticle

Gene expression signature that predicts early molecular response failure in chronic-phase CML patients on frontline imatinib

Kok, C., Yeung, D., Lu, L., Watkins, D. B., Gray, T., Dang, Y., Saunders, V., Reynolds, J., White, D. & Hughes, T., 28 May 2019, In : Blood Advances. 3, 10, p. 1610-1621 12 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Genetic editing of colonic organoids provides a molecularly distinct and orthotopic preclinical model of serrated carcinogenesis

Lannagan, T. R. M., Lee, Y. K., Wang, T., Roper, J., Bettington, M. L., Fennell, L., Vrbanac, L., Jonavicius, L., Somashekar, R., Gieniec, K., Yang, M., Ng, J. Q., Suzuki, N., Ichinose, M., Wright, J. A., Kobayashi, H., Putoczki, T. L., Hayakawa, Y., Leedham, S. J., Abud, H. E. & 10 othersYilmaz, Ö. H., Marker, J., Klebe, S., Wirapati, P., Mukherjee, S., Tejpar, S., Leggett, B. A., Whitehall, V. L. J., Worthley, D. L. & Woods, S. L., 1 Apr 2019, In : Gut. 68, 4, p. 684-692 9 p.

Research output: Contribution to journalArticle

Haemoglobin expression in in vivo murine preimplantation embryos suggests a role in oxygen-regulated gene expression

Lim, M., Brown, H. M., Kind, K. L., Breen, J., Anastasi, M. R., Ritter, L. J., Tregoweth, E. K., Dinh, D. T., Thompson, J. G. & Dunning, K. R., 1 Jan 2019, In : Reproduction, Fertility and Development. 31, 4, p. 724-734 11 p.

Research output: Contribution to journalArticle

Histone deacetylases 1 and 2 inhibition suppresses cytokine production and osteoclast bone resorption in vitro

Algate, K., Haynes, D., Fitzsimmons, T., Romeo, O., Wagner, F., Holson, E., Reid, R., Fairlie, D., Bartold, P. & Cantley, M., 1 Jan 2019, In : Journal of Cellular Biochemistry.

Research output: Contribution to journalArticle

Host Microbiota Regulates Central Nervous System Serotonin Receptor 2C Editing in Rodents

Van De Wouw, M., Stilling, R. M., Peterson, V. L., Ryan, F., Hoban, A. E., Shanahan, F., Clarke, G., Claesson, M. J., Dinan, T. G., Cryan, J. F. & Schellekens, H., 15 Aug 2019, In : ACS Chemical Neuroscience. 10, 9, p. 3953-3960 8 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Hyaluronic acid-based nanogels improve in vivo compatibility of the anti-biofilm peptide DJK-5

Kłodzińska, S. N., Pletzer, D., Rahanjam, N., Rades, T., Hancock, R. & Nielsen, H. M., 1 Aug 2019, In : Nanomedicine: Nanotechnology, Biology, and Medicine. 20, 102022.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Hygiene During Childbirth: An Observational Study to Understand Infection Risk in Healthcare Facilities in Kogi and Ebonyi States, Nigeria

Buxton, H., Flynn, E., Oluyinka, O., Cumming, O., Esteves Mills, J., Shiras, T., Sara, S. & Dreibelbis, R., 11 Apr 2019, In : International journal of environmental research and public health. 16, 7

Research output: Contribution to journalArticle

Identification of Novel Adenosine Deaminase 2 Gene Variants and Varied Clinical Phenotype in Pediatric Vasculitis

on behalf of the PedVas Investigators Network, 1 Oct 2019, In : Arthritis and Rheumatology. 71, 10, p. 1747-1755 9 p.

Research output: Contribution to journalArticle

Incidence, outcomes, and risk factors of pleural effusion in patients receiving dasatinib therapy for philadelphia chromosome-positive leukemia

Hughes, T. P., Laneuville, P., Rousselot, P., Snyder, D. S., Rea, D., Shah, N. P., Paar, D., Abruzzese, E., Hochhaus, A., Lipton, J. H. & Cortes, J. E., 2019, In : Haematologica. 104, 1, p. 93-101 9 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Inclusivity and equity in human microbiome research

Rogers, G., Ward, J., Brown, A. & Wesselingh, S., 23 Feb 2019, In : The Lancet. 393, 10173, p. 728-729 2 p.

Research output: Contribution to journalComment/debate

13 Citations (Scopus)

Inhibition of de novo lipogenesis targets androgen receptor signaling in castration-resistant prostate cancer

Zadra, G., Ribeiro, C. F., Chetta, P., Ho, Y., Cacciatore, S., Gao, X., Syamala, S., Bango, C., Photopoulos, C., Huang, Y., Tyekucheva, S., Bastos, D. C., Tchaicha, J., Lawney, B., Uo, T., D'Anello, L., Csibi, A., Kalekar, R., Larimer, B., Ellis, L. & 12 othersButler, L. M., Morrissey, C., McGovern, K., Palombella, V. J., Kutok, J. L., Mahmood, U., Bosari, S., Adams, J., Peluso, S., Dehm, S. M., Plymate, S. R. & Loda, M., 8 Jan 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 2, p. 631-640 10 p.

Research output: Contribution to journalArticle

3 Citations (Scopus)

Inhibition of polyamine synthesis and uptake reduces tumor progression and prolongs survival in mouse models of neuroblastoma

Gamble, L. D., Purgato, S., Murray, J., Xiao, L., Yu, D. M. T., Hanssen, K. M., Giorgi, F. M., Carter, D. R., Gifford, A. J., Valli, E., Milazzo, G., Kamili, A., Mayoh, C., Liu, B., Eden, G., Sarraf, S., Allan, S., Giacomo, S. D., Flemming, C. L., Russell, A. J. & 13 othersCheung, B. B., Oberthuer, A., London, W. B., Fischer, M., Trahair, T. N., Fletcher, J. I., Marshall, G. M., Ziegler, D. S., Hogarty, M. D., Burns, M. R., Perini, G., Norris, M. D. & Haber, M., 30 Jan 2019, In : Science Translational Medicine. 11, 477, aau1099.

Research output: Contribution to journalArticle