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2020

Association Between Sulfur-Metabolizing Bacterial Communities in Stool and Risk of Distal Colorectal Cancer in Men

Nguyen, L. H., Ma, W., Wang, D. D., Cao, Y., Mallick, H., Gerbaba, T. K., Lloyd-Price, J., Abu-Ali, G., Hall, A. B., Sikavi, D., Drew, D. A., Mehta, R. S., Arze, C., Joshi, A. D., Yan, Y., Branck, T., DuLong, C., Ivey, K. L., Ogino, S., Rimm, E. B. & 5 othersSong, M., Garrett, W. S., Izard, J., Huttenhower, C. & Chan, A. T., 20 Jan 2020, In : Gastroenterology.

Research output: Contribution to journalArticle

DNA extraction approaches substantially influence the assessment of the human breast milk microbiome

Douglas, C. A., Ivey, K. L., Papanicolas, L. E., Best, K. P., Muhlhausler, B. S. & Rogers, G. B., 10 Jan 2020, In : Scientific Reports. 10, 1, p. 123

Research output: Contribution to journalArticle

1 Citation (Scopus)
2019

Acute colitis drives tolerance by persistently altering the epithelial barrier and innate and adaptive immunity

Wardill, H. R., Choo, J., Dmochowska, N., Mavrangelos, C., Campaniello, M. A., Bowen, J. M., Rogers, G. & Hughes, P. A., 18 Jun 2019, In : Inflammatory bowel diseases. 25, 7, p. 1196-1207 12 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

A network analysis of biomarkers for type 2 diabetes

Huang, T., Glass, K., Zeleznik, O. A., Kang, J. H., Ivey, K., Sonawane, A. R., Birmann, B. M., Hersh, C. P., Hu, F. B. & Tworoger, S. S., 1 Feb 2019, In : Diabetes. 68, 2, p. 281-290 10 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Bacterial viability in faecal transplants: Which bacteria survive?

Papanicolas, L. E., Choo, J., Wang, Y., Leong, L. E. X., Costello, S. P., Gordon, D. L., Wesselingh, S. & Rogers, G., 1 Mar 2019, In : EBioMedicine. 41, p. 509-516 8 p.

Research output: Contribution to journalArticle

13 Citations (Scopus)

Barriers and opportunities experienced by staff when implementing infection prevention and control guidelines during labour and delivery in health care facilities in Nigeria

Buxton, H., Flynn, E., Oluyinka, O., Cumming, O., EstevesMills, J., Shiras, T., Sara, S. & Dreibelbis, R., 5 Aug 2019, In : Journal of Hospital Infection.

Research output: Contribution to journalArticle

Biomineralization of platinum by escherichia coli

Shar, S. S., Reith, F., Shahsavari, E., Adetutu, E., Nurulita, Y., Al-Hothaly, K., Haleyur, N. & Ball, A. S., 1 Apr 2019, In : Metals. 9, 4, 407.

Research output: Contribution to journalArticle

1 Citation (Scopus)

B Part of It study: a longitudinal study to assess carriage of Neisseria meningitidis in first year university students in South Australia

McMillan, M., Walters, L., Mark, T., Lawrence, A., Leong, L. E. X., Sullivan, T., Rogers, G., Andrews, R. M. & Marshall, H. S., 3 Apr 2019, In : Human Vaccines and Immunotherapeutics. 15, 4, p. 987-994 8 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Case report: Identification of intra-laboratory blood culture contamination with Staphylococcus aureus by whole genome sequencing

Ashokan, A., Papanicolas, L. E., Leong, L. E. X., Theodossi, M., Daniel, S., Wesselingh, S., Rogers, G. & Gordon, D. L., 1 Aug 2019, In : Diagnostic Microbiology and Infectious Disease. 94, 4, p. 331-333 3 p.

Research output: Contribution to journalArticle

Changes in the Composition of the Gut Microbiota and the Blood Transcriptome in Preterm Infants at Less than 29 Weeks Gestation Diagnosed with Bronchopulmonary Dysplasia

Ryan, F., Drew, D. P., Douglas, C., Leong, L. E. X., Moldovan, M., Lynn, M., Fink, N., Sribnaia, A., Penttila, I., McPhee, A. J., Collins, C., Makrides, M., Gibson, R., Rogers, G. & Lynn, D., 29 Oct 2019, In : mSystems. 4, 5, e00484.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Effects of almond consumption on metabolic function and liver fat in overweight and obese adults with elevated fasting blood glucose: A randomised controlled trial

Bowen, J., Luscombe-Marsh, N. D., Stonehouse, W., Tran, C., Rogers, G., Johnson, N., Thompson, C. H. & Brinkworth, G. D., 1 Apr 2019, In : Clinical Nutrition ESPEN. 30, p. 10-18 9 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Examining the evidence for an adult healthy middle ear Microbiome

Jervis-Bardy, J., Leong, L. E. X., Papanicolas, L. E., Ivey, K., Chawla, S., Woods, C. M., Frauenfelder, C., Ooi, E. H. & Rogers, G., 4 Sep 2019, In : mSphere. 4, 5, e00456-19.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Hygiene During Childbirth: An Observational Study to Understand Infection Risk in Healthcare Facilities in Kogi and Ebonyi States, Nigeria

Buxton, H., Flynn, E., Oluyinka, O., Cumming, O., Esteves Mills, J., Shiras, T., Sara, S. & Dreibelbis, R., 11 Apr 2019, In : International journal of environmental research and public health. 16, 7

Research output: Contribution to journalArticle

2 Citations (Scopus)

Lean NAFLD: A Distinct Entity Shaped by Differential Metabolic Adaptation

Chen, F., Esmaili, S., Rogers, G., Bugianesi, E., Petta, S., Marchesini, G., Bayoumi, A., Metwally, M., Azardaryany, M. K., Coulter, S., Choo, J., Younes, R., Rosso, C., Liddle, C., Adams, L. A., Craxì, A., George, J. & Eslam, M., 23 Aug 2019, In : Hepatology. 71, 4, p. 1213-1227 15 p.

Research output: Contribution to journalArticle

8 Citations (Scopus)

Long-Term Azithromycin Reduces Haemophilus influenzae and Increases Antibiotic Resistance in Severe Asthma

Taylor, S., Leong, L. E. X., Mobegi, F., Choo, J., Wesselingh, S., Yang, I. A., Upham, J. W., Reynolds, P. N., Hodge, S., James, A. L., Jenkins, C., Peters, M. J., Baraket, M., Marks, G. B., Gibson, P. G., Rogers, G. & Simpson, J. L., 1 Aug 2019, In : American journal of respiratory and critical care medicine. 200, 3, p. 309-317 9 p.

Research output: Contribution to journalArticle

12 Citations (Scopus)

Long-term macrolide antibiotics for the treatment of bronchiectasis in adults: an individual participant data meta-analysis

Chalmers, J. D., Boersma, W., Lonergan, M., Jayaram, L., Crichton, M. L., Karalus, N., Taylor, S., Martin, M. L., Burr, L. D., Wong, C. & Altenburg, J., 1 Oct 2019, In : The Lancet Respiratory Medicine. 7, 10, p. 845-854 10 p.

Research output: Contribution to journalArticle

7 Citations (Scopus)

Lysine specific demethylase 1 inactivation enhances differentiation and promotes cytotoxic response when combined with all-trans retinoic acid in acute myeloid leukemia across subtypes

Smitheman, K. N., Severson, T. M., Rajapurkar, S. R., McCabe, M. T., Karpinich, N., Foley, J., Pappalardi, M. B., Hughes, A., Halsey, W., Thomas, E., Traini, C., Federowicz, K. E., Laraio, J., Mobegi, F., Ferron-Brady, G., Prinjha, R. K., Carpenter, C. L., Kruger, R. G., Wessels, L. & Mohammad, H. P., 1 Jun 2019, In : Haematologica. 104, 6, p. 1156-1167 12 p., 2018.199190.

Research output: Contribution to journalArticle

9 Citations (Scopus)

Mice lacking Casp1, Ifngr and Nos2 genes exhibit altered depressive- and anxiety-like behaviour, and gut microbiome composition

Inserra, A., Choo, J., Lewis, M., Rogers, G., Wong, M. L. & Licinio, J., 1 Dec 2019, In : Scientific Reports. 9, 1, p. 1-12 12 p., 6456.

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

Opportunistic bacteria confer the ability to ferment prebiotic starch in the adult cystic fibrosis gut

Wang, Y., Leong, L. E. X., Keating, R. L., Kanno, T., Abell, G. C. J., Mobegi, F. M., Choo, J. M., Wesselingh, S. L., Mason, A. J., Burr, L. D. & Rogers, G. B., 4 May 2019, In : Gut Microbes. 10, 3, p. 367-381 15 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)

Role of dietary flavonoid compounds in driving patterns of microbial community assembly

Ivey, K., Chan, A. T., Izard, J., Cassidy, A., Rogers, G. & Rimma, E. B., 24 Sep 2019, In : mBio. 10, 5, e01205-19.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Soluble fibre supplementation with and without a probiotic in adults with asthma: A 7-day randomised, double blind, three way cross-over trial

McLoughlin, R., Berthon, B. S., Rogers, G., Baines, K. J., Leong, L. E. X., Gibson, P. G., Williams, E. J. & Wood, L. G., 1 Aug 2019, In : EBioMedicine. 46, p. 473-485 13 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)

The capacity of the fecal microbiota from Malawian infants to ferment resistant starch

Wang, Y., Mortimer, E. K., Katundu, K. G. H., Kalanga, N., Leong, L. E. X., Gopalsamy, G. L., Christophersen, C. T., Richard, A. C., Shivasami, A., Abell, G. C. J., Young, G. P. & Rogers, G., 29 Jun 2019, In : Frontiers in Microbiology. 10, JUN, 01459.

Research output: Contribution to journalArticle

1 Citation (Scopus)

The contribution of genetic variation of streptococcus pneumoniae to the clinical manifestation of invasive pneumococcal disease

Cremers, A. J. H., Mobegi, F., Van Der Gaast-De Jongh, C., Van Weert, M., Van Opzeeland, F. J., Vehkala, M., Knol, M. J., Bootsma, H. J., Välimäki, N., Croucher, N. J., Meis, J. F., Bentley, S., Van Hijum, S. A. F. T., Corander, J., Zomer, A. L., Ferwerda, G. & De Jonge, M. I., 1 Jan 2019, In : Clinical Infectious Diseases. 68, 1, p. 61-69 9 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

The effect of sanitizers on microbial levels of chicken meat collected from commercial processing plants

Chousalkar, K., Sims, S., McWhorter, A., Khan, S. & Sexton, M., 1 Dec 2019, In : International journal of environmental research and public health. 16, 23, 4807.

Research output: Contribution to journalArticle

1 Citation (Scopus)

The gut microbiome regulates host glucose homeostasis via peripheral serotonin

Martin, A. M., Yabut, J. M., Choo, J., Page, A. J., Sun, E. W., Jessup, C. F., Wesselingh, S., Khan, W. I., Rogers, G., Steinberg, G. R. & Keating, D. J., 1 Oct 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 40, p. 19802-19804 3 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

The influence of the gut microbiome on host metabolism through the regulation of gut hormone release

Martin, A. M., Sun, E. W., Rogers, G. & Keating, D. J., 16 Apr 2019, In : Frontiers in Physiology. 10, MAR, 428.

Research output: Contribution to journalArticle

14 Citations (Scopus)
2018

Antibiotic exposure and interpersonal variance mask the effect of ivacaftor on respiratory microbiota composition

Peleg, A. Y., Choo, J. M., Langan, K. M., Edgeworth, D., Keating, D., Wilson, J., Rogers, G. B. & Kotsimbos, T., 1 Jan 2018, In : Journal of Cystic Fibrosis. 17, 1, p. 50-56 7 p.

Research output: Contribution to journalArticle

11 Citations (Scopus)

Barley β-glucan increases fecal bile acid excretion and short chain fatty acid levels in mildly hypercholesterolemic individuals

Thandapilly, S. J., Ndou, S. P., Wang, Y., Nyachoti, C. M. & Ames, N. P., 1 Jun 2018, In : Food and Function. 9, 6, p. 3092-3096 5 p.

Research output: Contribution to journalArticle

16 Citations (Scopus)

Clinical and symptom scores are significantly correlated with fecal microbiota features in patients with symptomatic uncomplicated diverticular disease: A pilot study

Kvasnovsky, C. L., Leong, L. E. X., Choo, J. M., Abell, G. C. J., Papagrigoriadis, S., Bruce, K. D. & Rogers, G. B., 1 Jan 2018, In : European Journal of Gastroenterology and Hepatology. 30, 1, p. 107-112 6 p.

Research output: Contribution to journalArticle

18 Citations (Scopus)

Dietary Gluten Intake and Risk of Microscopic Colitis Among US Women without Celiac Disease: A Prospective Cohort Study

Liu, P. H., Lebwohl, B., Burke, K. E., Ivey, K., Ananthakrishnan, A. N., Lochhead, P., Olen, O., Ludvigsson, J. F., Richter, J. M., Chan, A. T. & Khalili, H., 1 Jan 2018, (Accepted/In press) In : American Journal of Gastroenterology.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Draft genome sequence of a non-O1/O139 vibrio cholerae strain isolated from a patient presenting with dysuria

Leong, L. E. X., Gordon, D. L. & Rogers, G., 26 Jul 2018, In : Microbiology Resource Announcements. 7, 3, e00883-18.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Early-life antibiotic-driven dysbiosis leads to dysregulated vaccine immune responses in mice

Lynn, M., Tumes, D., Choo, J., Sribnaia, A., Blake, S., Leong, L., Young, G., Marshall, H., Wesselingh, S., Rogers, G. & Lynn, D., 2018, In : Cell Host & Microbe . 23, p. 1-8

Research output: Contribution to journalArticle

Open Access
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21 Citations (Scopus)

HNF1A variant, energy-reduced diets and insulin resistance improvement during weight loss: The POUNDS Lost trial and DIRECT

Huang, T., Wang, T., Heianza, Y., Sun, D., Ivey, K., Durst, R., Schwarzfuchs, D., Stampfer, M. J., Bray, G. A., Sacks, F. M., Shai, I. & Qi, L., 1 Jun 2018, In : Diabetes, Obesity and Metabolism. 20, 6, p. 1445-1452 8 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Impact of Long-Term Erythromycin Therapy on the Oropharyngeal Microbiome and Resistance Gene Reservoir in Non-Cystic Fibrosis Bronchiectasis

Choo, J., Abell, G. C. J., Thomson, R., Morgan, L., Waterer, G., Gordon, D. L., Taylor, S., Leong, L. E. X., Wesselingh, S., Burr, L. D. & Rogers, G., 25 Apr 2018, In : mSphere. 3, 2

Research output: Contribution to journalArticle

Open Access
9 Citations (Scopus)

Metatranscriptome of human faecal microbial communities in a cohort of adult men

Abu-Ali, G. S., Mehta, R. S., Lloyd-Price, J., Mallick, H., Branck, T., Ivey, K., Drew, D. A., Dulong, C., Rimm, E., Izard, J., Chan, A. T. & Huttenhower, C., 1 Mar 2018, In : Nature Microbiology. 3, 3, p. 356-366 11 p.

Research output: Contribution to journalArticle

37 Citations (Scopus)

Microbial Degradation of Phenanthrene in Pristine and Contaminated Sandy Soils

Schwarz, A., Adetutu, E. M., Juhasz, A. L., Aburto-Medina, A., Ball, A. S. & Shahsavari, E., 1 May 2018, In : Microbial Ecology. 75, 4, p. 888-902 15 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Multi-Centre Ethics and Research Governance Review Can Impede Non-Interventional Clinical Research

Duplancic, C., Crough, T., Bell, S. C. & Rogers, G., 12 Nov 2018, In : Internal Medicine Journal.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Optimisation of a propidium monoazide based method to determine the viability of microbes in faecal slurries for transplantation

Papanicolas, L. E., Wang, Y., Choo, J. M., Gordon, D. L., Wesselingh, S. L. & Rogers, G. B., 4 Dec 2018, In : Journal of microbiological methods. 156, p. 40-45 6 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

PPARγ is reduced in the airways of non-CF bronchiectasis subjects and is inversely correlated with the presence of Pseudomonas aeruginosa

Burr, L. D., Rogers, G., Chen, A. C. H., Taylor, S., Bowler, S. D., Keating, R. L., Martin, M. L., Hasnain, S. Z. & McGuckin, M. A., 1 Aug 2018, In : PloS one. 13, 8, e0202296.

Research output: Contribution to journalArticle

Prospective study of flavonoid intake and risk of primary open-angle glaucoma

Kang, J. H., Ivey, K., Boumenna, T., Rosner, B., Wiggs, J. L. & Pasquale, L. R., 1 Sep 2018, In : Acta Ophthalmologica. 96, 6, p. e692-e700

Research output: Contribution to journalArticle

7 Citations (Scopus)

Stability of the human faecal microbiome in a cohort of adult men

Mehta, R. S., Abu-Ali, G. S., Drew, D. A., Lloyd-Price, J., Subramanian, A., Lochhead, P., Joshi, A. D., Ivey, K., Khalili, H., Brown, G. T., Dulong, C., Song, M., Nguyen, L. H., Mallick, H., Rimm, E. B., Izard, J., Huttenhower, C. & Chan, A. T., 1 Mar 2018, In : Nature Microbiology. 3, 3, p. 347-355 9 p.

Research output: Contribution to journalArticle

36 Citations (Scopus)
4 Citations (Scopus)

Whole-genome sequencing reveals the first reported point outbreak of Burkholderia lata through intrinsically contaminated chlorhexidine mouthwash. Emerging Infectious Diseases

Leong, L., Lagana, D., Carter, G. P., Wang, Q., Smith, K., Stinear, T. P., Shaw, D., Sintchenko, V., Wesselingh, S., Bastian, I. & Rogers, G., Nov 2018, In : Emerging Infectious Diseases. 24, 11

Research output: Contribution to journalArticle

File
2017

Association of Vegetable Nitrate Intake with Carotid Atherosclerosis and Ischemic Cerebrovascular Disease in Older Women

Bondonno, C. P., Blekkenhorst, L. C., Prince, R. L., Ivey, K., Lewis, J. R., Devine, A., Woodman, R. J., Lundberg, J. O., Croft, K. D., Thompson, P. L. & Hodgson, J. M., 1 Jul 2017, In : Stroke. 48, 7, p. 1724-1729 6 p.

Research output: Contribution to journalArticle

24 Citations (Scopus)

Characterization of the Theileria parva sporozoite proteome

Nyagwange, J., Tijhaar, E., Ternette, N., Mobegi, F., Tretina, K., Silva, J. C., Pelle, R. & Nene, V., 16 Dec 2017, In : International Journal for Parasitology.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Complete genome sequences of the endophytic Streptomyces sp. strains LUP30 and LUP47B, isolated from lucerne plants

Franco, C. M. M., Adetutu, E. M., Le, H. X., Ballard, R. A., Araujo, R., Tobe, S. S., Paul, B., Mallya, S. & Satyamoorthy, K., 2017, In : Genome Announcements. 5, 24, e00556-17.

Research output: Contribution to journalArticle

3 Citations (Scopus)

Deciphering the distance to antibiotic resistance for the pneumococcus using genome sequencing data

Mobegi, F., Cremers, A. J. H., De Jonge, M. I., Bentley, S. D., Van Hijum, S. A. F. T. & Zomer, A., 16 Feb 2017, In : Scientific Reports. 7, 42808.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Divergent relationships between fecal microbiota and metabolome following distinct antibiotic-induced disruptions

Choo, J. M., Kanno, T., Zain, N. M. M., Leong, L. E. X., Abell, G. C. J., Keeble, J. E., Bruce, K. D., Mason, A. J. & Rogers, G. B., 1 Jan 2017, In : mSphere. 2, 1, e00005-17.

Research output: Contribution to journalArticle

9 Citations (Scopus)

Draft genome sequences of two Enterobacter cloacae subsp. cloacae strains isolated from Australian hematology patients with bacteremia

Leong, L. E. X., Shaw, D., Papanicolas, L., Lagana, D., Bastian, I. & Rogers, G. B., 1 Aug 2017, In : Genome Announcements. 5, 33, e00756-17.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Effect of azithromycin on asthma exacerbations and quality of life in adults with persistent uncontrolled asthma (AMAZES): a randomised, double-blind, placebo-controlled trial

Gibson, P. G., Yang, I. A., Upham, J. W., Reynolds, P. N., Hodge, S., James, A. L., Jenkins, C., Peters, M. J., Marks, G. B., Baraket, M., Powell, H., Taylor, S. L., Leong, L. E. X., Rogers, G. B. & Simpson, J. L., 4 Jul 2017, In : The Lancet.

Research output: Contribution to journalArticle

161 Citations (Scopus)