Research Output

2020

Association Between Sulfur-Metabolizing Bacterial Communities in Stool and Risk of Distal Colorectal Cancer in Men

Nguyen, L. H., Ma, W., Wang, D. D., Cao, Y., Mallick, H., Gerbaba, T. K., Lloyd-Price, J., Abu-Ali, G., Hall, A. B., Sikavi, D., Drew, D. A., Mehta, R. S., Arze, C., Joshi, A. D., Yan, Y., Branck, T., DuLong, C., Ivey, K. L., Ogino, S., Rimm, E. B. & 5 othersSong, M., Garrett, W. S., Izard, J., Huttenhower, C. & Chan, A. T., 20 Jan 2020, In : Gastroenterology.

Research output: Contribution to journalArticle

DNA extraction approaches substantially influence the assessment of the human breast milk microbiome

Douglas, C. A., Ivey, K. L., Papanicolas, L. E., Best, K. P., Muhlhausler, B. S. & Rogers, G. B., 10 Jan 2020, In : Scientific Reports. 10, 1, p. 123

Research output: Contribution to journalArticle

1 Citation (Scopus)
2019

Acute colitis drives tolerance by persistently altering the epithelial barrier and innate and adaptive immunity

Wardill, H. R., Choo, J., Dmochowska, N., Mavrangelos, C., Campaniello, M. A., Bowen, J. M., Rogers, G. & Hughes, P. A., 18 Jun 2019, In : Inflammatory bowel diseases. 25, 7, p. 1196-1207 12 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

A network analysis of biomarkers for type 2 diabetes

Huang, T., Glass, K., Zeleznik, O. A., Kang, J. H., Ivey, K., Sonawane, A. R., Birmann, B. M., Hersh, C. P., Hu, F. B. & Tworoger, S. S., 1 Feb 2019, In : Diabetes. 68, 2, p. 281-290 10 p.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Bacterial viability in faecal transplants: Which bacteria survive?

Papanicolas, L. E., Choo, J., Wang, Y., Leong, L. E. X., Costello, S. P., Gordon, D. L., Wesselingh, S. & Rogers, G., 1 Mar 2019, In : EBioMedicine. 41, p. 509-516 8 p.

Research output: Contribution to journalArticle

13 Citations (Scopus)

Barriers and opportunities experienced by staff when implementing infection prevention and control guidelines during labour and delivery in health care facilities in Nigeria

Buxton, H., Flynn, E., Oluyinka, O., Cumming, O., EstevesMills, J., Shiras, T., Sara, S. & Dreibelbis, R., 5 Aug 2019, In : Journal of Hospital Infection.

Research output: Contribution to journalArticle

Biomineralization of platinum by escherichia coli

Shar, S. S., Reith, F., Shahsavari, E., Adetutu, E., Nurulita, Y., Al-Hothaly, K., Haleyur, N. & Ball, A. S., 1 Apr 2019, In : Metals. 9, 4, 407.

Research output: Contribution to journalArticle

1 Citation (Scopus)

B Part of It study: a longitudinal study to assess carriage of Neisseria meningitidis in first year university students in South Australia

McMillan, M., Walters, L., Mark, T., Lawrence, A., Leong, L. E. X., Sullivan, T., Rogers, G., Andrews, R. M. & Marshall, H. S., 3 Apr 2019, In : Human Vaccines and Immunotherapeutics. 15, 4, p. 987-994 8 p.

Research output: Contribution to journalArticle

4 Citations (Scopus)

Case report: Identification of intra-laboratory blood culture contamination with Staphylococcus aureus by whole genome sequencing

Ashokan, A., Papanicolas, L. E., Leong, L. E. X., Theodossi, M., Daniel, S., Wesselingh, S., Rogers, G. & Gordon, D. L., 1 Aug 2019, In : Diagnostic Microbiology and Infectious Disease. 94, 4, p. 331-333 3 p.

Research output: Contribution to journalArticle

Changes in the Composition of the Gut Microbiota and the Blood Transcriptome in Preterm Infants at Less than 29 Weeks Gestation Diagnosed with Bronchopulmonary Dysplasia

Ryan, F., Drew, D. P., Douglas, C., Leong, L. E. X., Moldovan, M., Lynn, M., Fink, N., Sribnaia, A., Penttila, I., McPhee, A. J., Collins, C., Makrides, M., Gibson, R., Rogers, G. & Lynn, D., 29 Oct 2019, In : mSystems. 4, 5, e00484.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Do we really understand how faecal microbiota transplantation works? Authors' reply

Papanicolas, L. E., Wesselingh, S. & Rogers, G., 1 Apr 2019, In : EBioMedicine. 42, 1 p.

Research output: Contribution to journalComment/debate

Effects of almond consumption on metabolic function and liver fat in overweight and obese adults with elevated fasting blood glucose: A randomised controlled trial

Bowen, J., Luscombe-Marsh, N. D., Stonehouse, W., Tran, C., Rogers, G., Johnson, N., Thompson, C. H. & Brinkworth, G. D., 1 Apr 2019, In : Clinical Nutrition ESPEN. 30, p. 10-18 9 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Erratum: Correction: Dietary Gluten Intake and Risk of Microscopic Colitis Among US Women Without Celiac Disease: A Prospective Cohort Study (The American journal of gastroenterology (2019) 114 1 (127-134))

Liu, P. H., Lebwohl, B., Burke, K. E., Ivey, K., Ananthakrishnan, A. N., Lochhead, P., Olen, O., Ludvigsson, J. F., Richter, J. M., Chan, A. T. & Khalili, H., 1 May 2019, In : The American journal of gastroenterology. 114, 5, 1 p.

Research output: Contribution to journalComment/debate

Erratum: Correction: Dietary Gluten Intake and Risk of Microscopic Colitis Among US Women Without Celiac Disease: A Prospective Cohort Study (The American journal of gastroenterology (2019) 114 1 (127-134))

Liu, P. H., Lebwohl, B., Burke, K. E., Ivey, K., Ananthakrishnan, A. N., Lochhead, P., Olen, O., Ludvigsson, J. F., Richter, J. M., Chan, A. T. & Khalili, H., 1 May 2019, In : The American journal of gastroenterology. 114, 5, 1 p.

Research output: Contribution to journalComment/debate

Examining the evidence for an adult healthy middle ear Microbiome

Jervis-Bardy, J., Leong, L. E. X., Papanicolas, L. E., Ivey, K., Chawla, S., Woods, C. M., Frauenfelder, C., Ooi, E. H. & Rogers, G., 4 Sep 2019, In : mSphere. 4, 5, e00456-19.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Hygiene During Childbirth: An Observational Study to Understand Infection Risk in Healthcare Facilities in Kogi and Ebonyi States, Nigeria

Buxton, H., Flynn, E., Oluyinka, O., Cumming, O., Esteves Mills, J., Shiras, T., Sara, S. & Dreibelbis, R., 11 Apr 2019, In : International journal of environmental research and public health. 16, 7

Research output: Contribution to journalArticle

2 Citations (Scopus)

Inclusivity and equity in human microbiome research

Rogers, G., Ward, J., Brown, A. & Wesselingh, S., 23 Feb 2019, In : The Lancet. 393, 10173, p. 728-729 2 p.

Research output: Contribution to journalComment/debate

3 Citations (Scopus)

Interventions to improve water supply and quality, sanitation and handwashing facilities in healthcare facilities, and their effect on healthcare-Associated infections in low-income and middle-income countries: A systematic review and supplementary scoping review

Watson, J., D'Mello-Guyett, L., Flynn, E., Falconer, J., Esteves-Mills, J., Prual, A., Hunter, P., Allegranzi, B., Montgomery, M. & Cumming, O., 1 Jul 2019, In : BMJ Global Health. 4, 4, e001632.

Research output: Contribution to journalReview article

Lack of CASP1, IFNGR and NOS2 Genes Alter Depressive-, Anxiety-Like Behavior and Gut Microbiota

Wong, M-L., Inserra, A., Choo, J., Lewis, M., Rogers, G. & Licinio, J., 15 May 2019, In : Biological Psychiatry. 85, 10, Supplement, p. S174-S175 T118.

Research output: Contribution to journalMeeting Abstract

Lean NAFLD: A Distinct Entity Shaped by Differential Metabolic Adaptation

Chen, F., Esmaili, S., Rogers, G., Bugianesi, E., Petta, S., Marchesini, G., Bayoumi, A., Metwally, M., Azardaryany, M. K., Coulter, S., Choo, J., Younes, R., Rosso, C., Liddle, C., Adams, L. A., Craxì, A., George, J. & Eslam, M., 23 Aug 2019, In : Hepatology. 71, 4, p. 1213-1227 15 p.

Research output: Contribution to journalArticle

8 Citations (Scopus)

Long-Term Azithromycin Reduces Haemophilus influenzae and Increases Antibiotic Resistance in Severe Asthma

Taylor, S., Leong, L. E. X., Mobegi, F., Choo, J., Wesselingh, S., Yang, I. A., Upham, J. W., Reynolds, P. N., Hodge, S., James, A. L., Jenkins, C., Peters, M. J., Baraket, M., Marks, G. B., Gibson, P. G., Rogers, G. & Simpson, J. L., 1 Aug 2019, In : American journal of respiratory and critical care medicine. 200, 3, p. 309-317 9 p.

Research output: Contribution to journalArticle

12 Citations (Scopus)

Long-term macrolide antibiotics for the treatment of bronchiectasis in adults: an individual participant data meta-analysis

Chalmers, J. D., Boersma, W., Lonergan, M., Jayaram, L., Crichton, M. L., Karalus, N., Taylor, S., Martin, M. L., Burr, L. D., Wong, C. & Altenburg, J., 1 Oct 2019, In : The Lancet Respiratory Medicine. 7, 10, p. 845-854 10 p.

Research output: Contribution to journalArticle

7 Citations (Scopus)

Lysine specific demethylase 1 inactivation enhances differentiation and promotes cytotoxic response when combined with all-trans retinoic acid in acute myeloid leukemia across subtypes

Smitheman, K. N., Severson, T. M., Rajapurkar, S. R., McCabe, M. T., Karpinich, N., Foley, J., Pappalardi, M. B., Hughes, A., Halsey, W., Thomas, E., Traini, C., Federowicz, K. E., Laraio, J., Mobegi, F., Ferron-Brady, G., Prinjha, R. K., Carpenter, C. L., Kruger, R. G., Wessels, L. & Mohammad, H. P., 1 Jun 2019, In : Haematologica. 104, 6, p. 1156-1167 12 p., 2018.199190.

Research output: Contribution to journalArticle

9 Citations (Scopus)

Mice lacking Casp1, Ifngr and Nos2 genes exhibit altered depressive- and anxiety-like behaviour, and gut microbiome composition

Inserra, A., Choo, J., Lewis, M., Rogers, G., Wong, M. L. & Licinio, J., 1 Dec 2019, In : Scientific Reports. 9, 1, p. 1-12 12 p., 6456.

Research output: Contribution to journalArticle

Open Access
1 Citation (Scopus)

Neuroimmunomodulation in Major Depressive Disorder: Focus on Caspase 1, Inducible Nitric Oxide Synthase, and Interferon-Gamma

Inserra, A., Mastronardi, C. A., Rogers, G., Licinio, J. & Wong, M. L., 1 Jun 2019, In : Molecular Neurobiology. 56, 6, p. 4288-4305 18 p.

Research output: Contribution to journalReview article

10 Citations (Scopus)

Opportunistic bacteria confer the ability to ferment prebiotic starch in the adult cystic fibrosis gut

Wang, Y., Leong, L. E. X., Keating, R. L., Kanno, T., Abell, G. C. J., Mobegi, F. M., Choo, J. M., Wesselingh, S. L., Mason, A. J., Burr, L. D. & Rogers, G. B., 4 May 2019, In : Gut Microbes. 10, 3, p. 367-381 15 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)

Role of dietary flavonoid compounds in driving patterns of microbial community assembly

Ivey, K., Chan, A. T., Izard, J., Cassidy, A., Rogers, G. & Rimma, E. B., 24 Sep 2019, In : mBio. 10, 5, e01205-19.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Soluble fibre supplementation with and without a probiotic in adults with asthma: A 7-day randomised, double blind, three way cross-over trial

McLoughlin, R., Berthon, B. S., Rogers, G., Baines, K. J., Leong, L. E. X., Gibson, P. G., Williams, E. J. & Wood, L. G., 1 Aug 2019, In : EBioMedicine. 46, p. 473-485 13 p.

Research output: Contribution to journalArticle

5 Citations (Scopus)

The capacity of the fecal microbiota from Malawian infants to ferment resistant starch

Wang, Y., Mortimer, E. K., Katundu, K. G. H., Kalanga, N., Leong, L. E. X., Gopalsamy, G. L., Christophersen, C. T., Richard, A. C., Shivasami, A., Abell, G. C. J., Young, G. P. & Rogers, G., 29 Jun 2019, In : Frontiers in Microbiology. 10, JUN, 01459.

Research output: Contribution to journalArticle

1 Citation (Scopus)

The contribution of genetic variation of streptococcus pneumoniae to the clinical manifestation of invasive pneumococcal disease

Cremers, A. J. H., Mobegi, F., Van Der Gaast-De Jongh, C., Van Weert, M., Van Opzeeland, F. J., Vehkala, M., Knol, M. J., Bootsma, H. J., Välimäki, N., Croucher, N. J., Meis, J. F., Bentley, S., Van Hijum, S. A. F. T., Corander, J., Zomer, A. L., Ferwerda, G. & De Jonge, M. I., 1 Jan 2019, In : Clinical Infectious Diseases. 68, 1, p. 61-69 9 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

The contribution of respiratory microbiome analysis to a treatable traits model of care

Taylor, S. L., O'Farrell, H. E., Simpson, J. L., Yang, I. A. & Rogers, G. B., 1 Jan 2019, In : Respirology. 24, 1, p. 19-28 10 p.

Research output: Contribution to journalReview article

5 Citations (Scopus)

The effect of sanitizers on microbial levels of chicken meat collected from commercial processing plants

Chousalkar, K., Sims, S., McWhorter, A., Khan, S. & Sexton, M., 1 Dec 2019, In : International journal of environmental research and public health. 16, 23, 4807.

Research output: Contribution to journalArticle

1 Citation (Scopus)

The gut microbiome regulates host glucose homeostasis via peripheral serotonin

Martin, A. M., Yabut, J. M., Choo, J., Page, A. J., Sun, E. W., Jessup, C. F., Wesselingh, S., Khan, W. I., Rogers, G., Steinberg, G. R. & Keating, D. J., 1 Oct 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 40, p. 19802-19804 3 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

The impact of CFTR modulator therapies on CF airway microbiology

Rogers, G., Taylor, S., Hoffman, L. R. & Burr, L. D., 12 Aug 2019, In : Journal of Cystic Fibrosis.

Research output: Contribution to journalReview article

3 Citations (Scopus)

The influence of the gut microbiome on host metabolism through the regulation of gut hormone release

Martin, A. M., Sun, E. W., Rogers, G. & Keating, D. J., 16 Apr 2019, In : Frontiers in Physiology. 10, MAR, 428.

Research output: Contribution to journalArticle

14 Citations (Scopus)

The nasopharyngeal microbiome and LRTIs in infants

Rogers, G., 1 May 2019, In : The Lancet Respiratory Medicine. 7, 5, p. 369-371 3 p.

Research output: Contribution to journalComment/debate

2018

Antibiotic exposure and interpersonal variance mask the effect of ivacaftor on respiratory microbiota composition

Peleg, A. Y., Choo, J. M., Langan, K. M., Edgeworth, D., Keating, D., Wilson, J., Rogers, G. B. & Kotsimbos, T., 1 Jan 2018, In : Journal of Cystic Fibrosis. 17, 1, p. 50-56 7 p.

Research output: Contribution to journalArticle

11 Citations (Scopus)

Barley β-glucan increases fecal bile acid excretion and short chain fatty acid levels in mildly hypercholesterolemic individuals

Thandapilly, S. J., Ndou, S. P., Wang, Y., Nyachoti, C. M. & Ames, N. P., 1 Jun 2018, In : Food and Function. 9, 6, p. 3092-3096 5 p.

Research output: Contribution to journalArticle

16 Citations (Scopus)

Burkholderia lata infections from intrinsically contaminated chlorhexidine Mouthwash, Australia, 2016

Leong, L. E. X., Lagana, D., Carter, G. P., Wang, Q., Smith, K., Stinear, T. P., Shaw, D., Sintchenko, V., Wesselingh, S., Bastian, I. & Rogers, G. B., 1 Nov 2018, In : Emerging Infectious Diseases. 24, 11, p. 2109-2111 3 p.

Research output: Contribution to journalLetter

2 Citations (Scopus)

Cellular regulation of peripheral serotonin

Martin, A. M., Young, R., Leong, L., Rogers, G., Spencer, N. J., Jessup, C. F. & Keating, D. J., 1 Jan 2018, Serotonin: The Mediator that Spans Evolution. Elsevier, p. 137-153 17 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Clinical and symptom scores are significantly correlated with fecal microbiota features in patients with symptomatic uncomplicated diverticular disease: A pilot study

Kvasnovsky, C. L., Leong, L. E. X., Choo, J. M., Abell, G. C. J., Papagrigoriadis, S., Bruce, K. D. & Rogers, G. B., 1 Jan 2018, In : European Journal of Gastroenterology and Hepatology. 30, 1, p. 107-112 6 p.

Research output: Contribution to journalArticle

18 Citations (Scopus)

Dietary Gluten Intake and Risk of Microscopic Colitis Among US Women without Celiac Disease: A Prospective Cohort Study

Liu, P. H., Lebwohl, B., Burke, K. E., Ivey, K., Ananthakrishnan, A. N., Lochhead, P., Olen, O., Ludvigsson, J. F., Richter, J. M., Chan, A. T. & Khalili, H., 1 Jan 2018, (Accepted/In press) In : American Journal of Gastroenterology.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Draft genome sequence of a non-O1/O139 vibrio cholerae strain isolated from a patient presenting with dysuria

Leong, L. E. X., Gordon, D. L. & Rogers, G., 26 Jul 2018, In : Microbiology Resource Announcements. 7, 3, e00883-18.

Research output: Contribution to journalArticle

1 Citation (Scopus)

Early-life antibiotic-driven dysbiosis leads to dysregulated vaccine immune responses in mice

Lynn, M., Tumes, D., Choo, J., Sribnaia, A., Blake, S., Leong, L., Young, G., Marshall, H., Wesselingh, S., Rogers, G. & Lynn, D., 2018, In : Cell Host & Microbe . 23, p. 1-8

Research output: Contribution to journalArticle

Open Access
File
21 Citations (Scopus)

HNF1A variant, energy-reduced diets and insulin resistance improvement during weight loss: The POUNDS Lost trial and DIRECT

Huang, T., Wang, T., Heianza, Y., Sun, D., Ivey, K., Durst, R., Schwarzfuchs, D., Stampfer, M. J., Bray, G. A., Sacks, F. M., Shai, I. & Qi, L., 1 Jun 2018, In : Diabetes, Obesity and Metabolism. 20, 6, p. 1445-1452 8 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Impact of Long-Term Erythromycin Therapy on the Oropharyngeal Microbiome and Resistance Gene Reservoir in Non-Cystic Fibrosis Bronchiectasis

Choo, J., Abell, G. C. J., Thomson, R., Morgan, L., Waterer, G., Gordon, D. L., Taylor, S., Leong, L. E. X., Wesselingh, S., Burr, L. D. & Rogers, G., 25 Apr 2018, In : mSphere. 3, 2

Research output: Contribution to journalArticle

Open Access
9 Citations (Scopus)

Infection's Sweet Tooth: How Glycans Mediate Infection and Disease Susceptibility

Taylor, S., McGuckin, M. A., Wesselingh, S. & Rogers, G., 1 Feb 2018, In : Trends in Microbiology. 26, 2, p. 92-101 10 p.

Research output: Contribution to journalReview article

9 Citations (Scopus)

Metatranscriptome of human faecal microbial communities in a cohort of adult men

Abu-Ali, G. S., Mehta, R. S., Lloyd-Price, J., Mallick, H., Branck, T., Ivey, K., Drew, D. A., Dulong, C., Rimm, E., Izard, J., Chan, A. T. & Huttenhower, C., 1 Mar 2018, In : Nature Microbiology. 3, 3, p. 356-366 11 p.

Research output: Contribution to journalArticle

37 Citations (Scopus)

Microbial Degradation of Phenanthrene in Pristine and Contaminated Sandy Soils

Schwarz, A., Adetutu, E. M., Juhasz, A. L., Aburto-Medina, A., Ball, A. S. & Shahsavari, E., 1 May 2018, In : Microbial Ecology. 75, 4, p. 888-902 15 p.

Research output: Contribution to journalArticle

6 Citations (Scopus)

Multi-Centre Ethics and Research Governance Review Can Impede Non-Interventional Clinical Research

Duplancic, C., Crough, T., Bell, S. C. & Rogers, G., 12 Nov 2018, In : Internal Medicine Journal.

Research output: Contribution to journalArticle

1 Citation (Scopus)